| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_4011 |
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| Symbol | rho |
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| ID | 8135002 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | - |
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| Start bp | 4526874 |
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| End bp | 4528226 |
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| Gene Length | 1353 bp |
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| Protein Length | 450 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 644867322 |
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| Product | transcription termination factor Rho |
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| Protein accession | YP_003019562 |
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| Protein GI | 253690372 |
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| COG category | [K] Transcription |
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| COG ID | [COG1158] Transcription termination factor |
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| TIGRFAM ID | [TIGR00767] transcription termination factor Rho |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGTTGAAG GCTGTTATAG AGGCACGGAT GATCCTGCCA TACCATTCAC GTTAATAGTT
CGAGATTTAC CCCGAGTTAA AGAACCCACC ACTATGAATC TTACCGAATT AAAGAATACG
CCAGTTTCTG AGTTAATTGC TCTTGGCGAA AATATGGGTC TGGAAAACCA GGCTCGCATG
CGTAAACAGG ATATTATCTT CGCTATTCTG AAACAGCATG CCAAAAGCGG CGAGGATATT
TTCGGCGATG GTGTGCTGGA GATATTGCAG GATGGCTTCG GCTTCCTCCG CTCAGCAGAC
AGCTCCTACC TCGCAGGCCC CGATGATATC TACGTTTCTC CCAGCCAAAT CCGCCGTTTT
AACCTCCGCA CTGGTGACAC CATTTCTGGC AAGATTCGTC CGCCGAAAGA AGGTGAACGC
TACTTTGCGC TGCTGAAAGT TAACGAAGTC AACTACGACA AACCTGAAAA CGCCCGCAAC
AAGATCCTGT TCGAAAACCT CACGCCACTG CATGCAAACT CTCGTCTGCG TATGGAACGC
GGTAATGGGT CGACAGAAGA TTTGACGGCG CGCGTGCTGG ATCTGGCTTC GCCGATTGGC
CGTGGTCAAC GTGGTCTGAT CGTTGCACCG CCTAAAGCAG GTAAAACCAT GCTGCTGCAG
AACATTGCGC AGAGCATTGC TTACAACCAT CCTGACTGCG TACTGATGGT TCTGCTGATT
GACGAACGTC CGGAAGAAGT TACCGAGATG CAGCGTCTGG TGAAAGGTGA AGTGGTTGCG
TCAACGTTCG ACGAACCGGC TTCTCGTCAC GTTCAGGTTG CCGAAATGGT GATCGAAAAA
GCGAAGCGTC TGGTTGAGCA TAAGAAAGAC GTTATCATCC TTCTGGACTC TATTACCCGT
CTGGCGCGTG CCTACAACAC CGTTGTTCCT GCCTCGGGCA AAGTGTTGAC TGGTGGTGTG
GATGCCAACG CCCTGCATCG TCCGAAGCGT TTCTTCGGTG CGGCACGTAA CGTTGAGGAA
GGCGGTAGCC TGACCATTAT CGCCACCGCG CTGGTTGATA CTGGCTCCAA GATGGATGAA
GTGATTTACG AAGAGTTTAA AGGTACAGGT AACATGGAAC TGCACCTGGC GCGTAAAATC
GCAGAAAAAC GCGTCTTCCC AGCGATTGAC TACAACCGCT CCGGTACGCG TAAAGAAGAA
TTGCTTACCA CCTCTGAAGA ATTGCAGAAG ATGTGGATTC TACGCAAGAT CATCCACCCA
ATGGGCGAGA TCGACGCGAT GGAATTCCTG ATCAACAAGT TGGCGATGAC AAAAACCAAC
GATGAATTCT TCGATATGAT GAAACGTTCA TAA
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| Protein sequence | MVEGCYRGTD DPAIPFTLIV RDLPRVKEPT TMNLTELKNT PVSELIALGE NMGLENQARM
RKQDIIFAIL KQHAKSGEDI FGDGVLEILQ DGFGFLRSAD SSYLAGPDDI YVSPSQIRRF
NLRTGDTISG KIRPPKEGER YFALLKVNEV NYDKPENARN KILFENLTPL HANSRLRMER
GNGSTEDLTA RVLDLASPIG RGQRGLIVAP PKAGKTMLLQ NIAQSIAYNH PDCVLMVLLI
DERPEEVTEM QRLVKGEVVA STFDEPASRH VQVAEMVIEK AKRLVEHKKD VIILLDSITR
LARAYNTVVP ASGKVLTGGV DANALHRPKR FFGAARNVEE GGSLTIIATA LVDTGSKMDE
VIYEEFKGTG NMELHLARKI AEKRVFPAID YNRSGTRKEE LLTTSEELQK MWILRKIIHP
MGEIDAMEFL INKLAMTKTN DEFFDMMKRS
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