Gene PC1_4008 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_4008 
Symbol 
ID8134999 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand- 
Start bp4523306 
End bp4524430 
Gene Length1125 bp 
Protein Length374 aa 
Translation table11 
GC content53% 
IMG OID644867319 
ProductUDP-N-acetylglucosamine 2-epimerase 
Protein accessionYP_003019559 
Protein GI253690369 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0381] UDP-N-acetylglucosamine 2-epimerase 
TIGRFAM ID[TIGR00236] UDP-N-acetylglucosamine 2-epimerase 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAAAGTAT TGACTGTTTT CGGCACCCGG CCGGAAGCCA TTAAAATGGC GCCGCTGGTT 
CATGCTCTGG CTCAGGATGG AGCCTTTGAA TCGAGAATTT GCGTAACAGC CCAGCATCGG 
GAGATGTTGG ATCAGGTGCT GCGTTTGTTC GATATTACGC CGGACTACGA TCTGGATATT 
ATGCGACCGG GACAGGGACT CAGTGAGATA TCCTGCCGGA TTTTATCGGG GCTTGAACCG 
GTCATGGCAG AGTTCAAGCC GGATCTGGTG TTGGTACACG GTGACACCAC GACGACGCTG 
GCAACCAGCC TCGCGGCCTT TTATCAGCGT ATTCCTGTCG GCCACGTAGA AGCAGGATTG 
CGTACAGGCA ATCTGTATTC GCCCTGGCCG GAAGAGGCTA ACCGTAAACT GACCGGGCAC 
CTGGCGATGT ACCATTTTGC CCCGACGGAA AATTCCCGCC AGAATTTACT GCGTGAGCAC 
CTGTCTGATC GGCATATTTT TGTGACTGGT AATACGGTGA TTGATGCGCT GTTCTGGGTA 
CGTGACCGTA TTCTCGGGGA TGCCGCGCTG CGCCGCAGCC TCGATGAAAA ATATGACTTT 
TTGGACGACA ACAAGAAACT GATTCTGGTT ACCGGACATC GACGCGAGAG TTTTGGCGGT 
GGCTTTGAGC GCATTTGTAG CGCGTTGGCG GATATCGCCC GTCGCCACCC TGAAGTGCAA 
ATTGTGTATC CGGTTCACCT CAATCCTAAC GTCAGCGAAC CCGTGAATCG TATCCTGAGC 
GGTATTGATA ATGTCATGCT GATTGCGCCG CAGGATTATT TGCCTTTCGT GTACCTGATG 
AATCGTTCTT ACATGATTTT GACCGACTCT GGTGGCATTC AGGAAGAAGC CCCGTCGTTA 
GGCAAGCCAG TACTGGTGAT GCGTGATACG ACGGAACGAC CGGAGGCGGT GGAAGCGGGT 
ACGGTCAAGC TGGTGGGGAC AGAGGTGGCT AACATTGTCG ATGCGGTATC TATGCTGCTA 
ACGGATGATG AGGCGTATCA GGCAATGAGC CGCGCCCACA ATCCTTATGG CGACGGTCAG 
GCCTGTCAAC GCATTGTTGA GGCGTTAAAA AATCATAGGC AATGA
 
Protein sequence
MKVLTVFGTR PEAIKMAPLV HALAQDGAFE SRICVTAQHR EMLDQVLRLF DITPDYDLDI 
MRPGQGLSEI SCRILSGLEP VMAEFKPDLV LVHGDTTTTL ATSLAAFYQR IPVGHVEAGL 
RTGNLYSPWP EEANRKLTGH LAMYHFAPTE NSRQNLLREH LSDRHIFVTG NTVIDALFWV 
RDRILGDAAL RRSLDEKYDF LDDNKKLILV TGHRRESFGG GFERICSALA DIARRHPEVQ 
IVYPVHLNPN VSEPVNRILS GIDNVMLIAP QDYLPFVYLM NRSYMILTDS GGIQEEAPSL 
GKPVLVMRDT TERPEAVEAG TVKLVGTEVA NIVDAVSMLL TDDEAYQAMS RAHNPYGDGQ 
ACQRIVEALK NHRQ