Gene PC1_4005 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_4005 
Symbol 
ID8134996 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand
Start bp4520051 
End bp4520782 
Gene Length732 bp 
Protein Length243 aa 
Translation table11 
GC content58% 
IMG OID644867316 
ProductTDP-fucosamine acetyltransferase 
Protein accessionYP_003019556 
Protein GI253690366 
COG category 
COG ID 
TIGRFAM ID[TIGR02382] TDP-D-fucosamine acetyltransferase 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCCATC CGGTATCAGT AGGACAGGGA AAGATTCGCG CCACGGTTGA ACCGCTGGGC 
TGGGAGAGTG AATTCTTCCA GCTTAACAGC GGTAAACTGA GTTTTTCCCC TGCTGCGCCC
GCGTTGACGC CTGATGTGCT GAGCGCATTT ACGCTGACGC AGGCCAAAAT TGCGGCGGAC
AATCTGATGT TGGCGGATGC ACTTGCCGAT CTTGGTTTTC GATTGGTAGA AGGCGAAGTT
GATCTCAGTC TGCCGCTGCA ACGGGCTACC GTGGTTACGC CGTTACCGCG CTGGCGTGAA
GCCGTGCCCG ACGATATCCC GGCGCTGAGG GACGCGGCAT CACGTGTTTT TGCGCTGAGC
CGTTTTCGTT CTCCGTGGTA CCAGCCGGAG GATAGCGGGC GTTTCTATGC GCAGTGGGTT
GAAAATGCCG TGCGCGGTAC GTTCGACCAC TGCTGTTTAC TGGCGGAAGA TACCGCTGGC
AATCCACAAG GATGGGTCAC GCTACGCAGA GTGGATGACA CGGATGCACG TATCGGACTA
CTGGGCGTTT GGCCTGGCGT TACGGTACGG GGCGTCGGTT CACAACTGAT GGCGCTGGCT
GAAACGTGGT GCCGACAACA AGGATTGATT CGTCTTCGGG TCGCGACGCA GGTTGGCAAC
GTGGCGGCGC TTCGTCTTTA TCTTCGCCGT GGTGCCACGA TTGAGAGCAC GGCGTATTGG
TTATACAGGT GA
 
Protein sequence
MTHPVSVGQG KIRATVEPLG WESEFFQLNS GKLSFSPAAP ALTPDVLSAF TLTQAKIAAD 
NLMLADALAD LGFRLVEGEV DLSLPLQRAT VVTPLPRWRE AVPDDIPALR DAASRVFALS
RFRSPWYQPE DSGRFYAQWV ENAVRGTFDH CCLLAEDTAG NPQGWVTLRR VDDTDARIGL
LGVWPGVTVR GVGSQLMALA ETWCRQQGLI RLRVATQVGN VAALRLYLRR GATIESTAYW
LYR