| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_4003 |
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| Symbol | |
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| ID | 8134994 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | - |
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| Start bp | 4517664 |
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| End bp | 4518914 |
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| Gene Length | 1251 bp |
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| Protein Length | 416 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 644867314 |
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| Product | polysaccharide biosynthesis protein |
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| Protein accession | YP_003019554 |
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| Protein GI | 253690364 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2244] Membrane protein involved in the export of O-antigen and teichoic acid |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCGTTGG CGAAAGCATC GATATGGACG GCTGGCTCTA CGCTGATAAA AATCGGCGCG
GGGCTGGTTG TCGTCAAACT GTTGGCGGTC ACGTTTGGCC CCAGCGGCGT GGGGATGGCA
GGGAATTTCC GCCAGTTGAT TACGGTGCTG GGAGTGTTAG CCGGCGCAGG GATCTTCAAC
GGCGTCACCA AATACGTGGC GGAGTATCAG CAGCAGCCGG AACGGCTGAA GCCGCTGCTC
GGTACGTCTG TCACGTTGGT GCTGGGCTTC TCTACCCTGC TGGCGATACT CTTTCTGGCC
GCTGCCACGC CTATTGCTCA TCTGTTGTTT GGGCATGACG ACTATCGTGA TGTGGTGCGT
GCGTTGGCGT TTATCCAAAT GGGTATCGCC TACGCCAACC TGTTTCTGGC GATCCTCAAA
GGTTATCGGG ATGCGATAGG CAACGCGCTG GCGGTGATCG GCGGTAGCCT GATCGGGCTG
GCAGCCTTTT GGCTCTGTCT GAAACTGGGT GGCTACGTTG GCGCACTGGC AGGGCTGGCG
CTGGTGCCCG CGCTGCTGGT GATTCCAGCA GGCATCATGC TACTGCGACG CACGCCACTG
TCGCTGGCGT CGCTAAAACC GGCGTGGGAG CGCGCTATTG CCGGTCAGTT GGGCAAGTTT
ACGCTGATGG CGTTGATGAC TGCGGTGACG TTACCTGTGG CGTACATCAT GATGCGTAAT
CTGCTGGCAG CTCATTACAG CTGGGATGAG GTGGGTATCT GGCAAGGCGT CAGCAGTATT
TCCGATGCGT ACCTGCAATT TATTACCGCC TCCTTTACCG TTTATCTGTT GCCGACACTG
TCGCGTCTGA CGGACAAAGC AGCGCTGGCG CAGGAGATTG TGCGCTCGCT GAAGTTTGTG
CTGCCCGTCG TGGCAGGCGT TAGTTTTTGC GTGTGGCTAC TGCGAGACTT TGCCATCTGG
CTGCTGTTTT CCAGTCAATT TACGGCAATG AGAGATCTCT TCGTTTGGCA GTTGGTAGGG
GATGTGATGA AAGTGGGCGC TTACGTCTTT GGCTATTTGG TCATCGCGAA AGCGGCGCTG
CGCTTTTATC TGCTCACGGA AGTCAGCCAG TTCCTCCTGC TGACCGGGTT TTCGCACTGG
CTGATTCCGC TTTATGGCGC ACAAGGCGCA GCGCAGGCTT ATATGGCAAC CTACCTGGTC
TATTTTTTGC TTTGTTGTTG CGTATTCATT ATTTACCGTA GGCGAGCATG A
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| Protein sequence | MSLAKASIWT AGSTLIKIGA GLVVVKLLAV TFGPSGVGMA GNFRQLITVL GVLAGAGIFN
GVTKYVAEYQ QQPERLKPLL GTSVTLVLGF STLLAILFLA AATPIAHLLF GHDDYRDVVR
ALAFIQMGIA YANLFLAILK GYRDAIGNAL AVIGGSLIGL AAFWLCLKLG GYVGALAGLA
LVPALLVIPA GIMLLRRTPL SLASLKPAWE RAIAGQLGKF TLMALMTAVT LPVAYIMMRN
LLAAHYSWDE VGIWQGVSSI SDAYLQFITA SFTVYLLPTL SRLTDKAALA QEIVRSLKFV
LPVVAGVSFC VWLLRDFAIW LLFSSQFTAM RDLFVWQLVG DVMKVGAYVF GYLVIAKAAL
RFYLLTEVSQ FLLLTGFSHW LIPLYGAQGA AQAYMATYLV YFLLCCCVFI IYRRRA
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