Gene PC1_4002 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_4002 
Symbol 
ID8134993 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand- 
Start bp4516582 
End bp4517667 
Gene Length1086 bp 
Protein Length361 aa 
Translation table11 
GC content53% 
IMG OID644867313 
Product4-alpha-L-fucosyltransferase 
Protein accessionYP_003019553 
Protein GI253690363 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones8 
Plasmid unclonability p-value0.783054 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGACAC TGATTCATGT ATTGGGATCT GATATCCCGC ATCATAACCA GACCGTTTTA 
CGTTTTTTTA ACGACGTACT GGCGACGGAA CTTCCCGAAC AGCAGATTCG GCATTTCATC 
GTGGCGTCCC GCGATGGCAT TTCATCGGCT GATTTTCCCG CGCTGCGTAT TGAAACCTGC 
GTGGATAAGA AAACGTTGGC CGAGGCGGTC ATCGCCAGGG CGAAAGCGAA CCGTAATATG 
CGCTTTTTCC TGCACGGTCA GTTTAACCCC ACGCTGTGGC TGGCGCTGCT GAGCGGAAAA 
ATCAAATCCG AGCAGGTTTA CTGGCACGTA TGGGGCGCGG ATTTGTATGA AGAAGCGAGC 
AGCCTGAAAT ATCGCCTGTT TTATTGGCTT CGACGCATGG CGCAAAAGCG TGTTGGACAC 
GTGTTTGCTA CGCGTGGCGA TCTGGCGTGG TATCAGCAGC GTGCGCCTCG TGTGCCGACG 
TCATTGCTGT ACTTCCCAAC GCGCATGAAT CCGGCACTAA CAGGCATGCA GGTGGATAAA 
CCGCTGGCAG GGCCGATGAC GATTCTGGTC GGCAATTCTG GCGATCGCAC GAATCGTCAT 
CAGGAAGCGC TGCGGGCGAT TCACAAGCAG TTCGGGAAAA ATGTGCGGGT GATTGTGCCA 
ATGGGCTACC CCGCGAATAA CGAATCCTAC ATCGCGCAGG TGGAAGGAGA CGGTTTGGCG 
CTGTTCGGCG TGAAAAATTT CCAGTTGCTG AAAGACCAAC TGGCGTTTGA TGATTATCTC 
AACATGCTGC GCACCTGCGA TTTGGGCTAT TTTATTTTCG ACCGACAGCA GGGAATCGGG 
ACGCTATGTC TGTTGATTCA GTTTGGCGTA CCTTTCGTGA TCAGTCGGCA AAATCCGTTC 
TGGCAGGATC TGACAGAACA GAACCTGCCC GTGCTGTTTT ACGGTGACGA GCTGGATGAA 
GCGTTGGTGC GTGAGGCGCA GCGCCAACTG GCATCGGTCG ATAAACACCA AATCGCGTTC 
TTTAATCCCA ATTATCTACA AGGCTGGCGG GATGCGCTGG CGTTGGCGAT GGGAGAACCA 
ACATGA
 
Protein sequence
MTTLIHVLGS DIPHHNQTVL RFFNDVLATE LPEQQIRHFI VASRDGISSA DFPALRIETC 
VDKKTLAEAV IARAKANRNM RFFLHGQFNP TLWLALLSGK IKSEQVYWHV WGADLYEEAS 
SLKYRLFYWL RRMAQKRVGH VFATRGDLAW YQQRAPRVPT SLLYFPTRMN PALTGMQVDK 
PLAGPMTILV GNSGDRTNRH QEALRAIHKQ FGKNVRVIVP MGYPANNESY IAQVEGDGLA 
LFGVKNFQLL KDQLAFDDYL NMLRTCDLGY FIFDRQQGIG TLCLLIQFGV PFVISRQNPF 
WQDLTEQNLP VLFYGDELDE ALVREAQRQL ASVDKHQIAF FNPNYLQGWR DALALAMGEP 
T