| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_3999 |
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| Symbol | |
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| ID | 8134990 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | - |
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| Start bp | 4512770 |
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| End bp | 4514161 |
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| Gene Length | 1392 bp |
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| Protein Length | 463 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 644867310 |
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| Product | putative transport protein YifK |
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| Protein accession | YP_003019550 |
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| Protein GI | 253690360 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1113] Gamma-aminobutyrate permease and related permeases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.00171121 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCAGAAG ATGTAAAGCA GGAAAAACTC CATCGGGGGT TAGAAGCCCG ACATATTGAG
CTGATTGCGC TGGGTGGCAC GATTGGCGTC GGGCTGTTTA TGGGCGCGGC GAGTGCGCTG
AAGTGGGCAG GGCCATCGGT ATTGCTGGCC TATATTGTCG CGGGGATCTT CGTTTTCTTC
ATCATGCGCT CAATGGGTGA GATGCTCTAT CTGGAGCCGG TCGCGGGATC GTTTGCCGTC
TACGCGCACA AATACATGAA TCCCTTTTTC GGTTATCTCA CCGCATGGGG TTATTGGTTT
ATGTGGATGG CGGTTGGGAT TTCGGAAATT ACCGCCATCG GCGTGTATGT TCAGTACTGG
TTCCCTGATT TGCCACAGTG GATACCGGCT ATCGCCGCGG TTGCGCTGGT GGCGGGCGCA
AACCTTGCGG CAGTCAGGCT GTATGGCGAA ATTGAATTCT GGTTCGCAAT GATAAAAATC
ACCACCATCG TTGTGATGAT TATCGTCGGC GTCGGCATTA TCTTCTTCGG CTTTGGTAAC
CACGGTCAGG CAACTGGATT CAGTAATCTG ACCGAACACG GCGGTTTTCT GGCCGGAGGC
TGGAAAGGTC TGCTGTTTGC ACTCTGTCTG GTGGTGGCGT CTTATCAGGG CGTTGAGCTG
GTCGGTATCA CGGCGGGTGA GGCGAAAAAT CCGCAGGTGA CGCTGAAGCG AGCAATCAAC
AACATTCTGT GGCGTATCCT GATTTTCTAC GTGGGCGCGA TCTTCGTTAT CGTCACGATT
TTCCCCTGGA ATGAAATCGG CACGTCCGGC AGTCCGTTTG TGCTGACGTT TGCGAAAATC
GGTATCACGG CAGCCGCGGG TATCATCAAC TTTGTGGTGC TGACGGCTGC GCTGTCGGGG
TGTAACAGCG GTATGTATAG CTGTGGACGT ATGCTGTATT CGCTGGCCAA CAATCGCCAG
CTTCCTGCCT GGTTAGGTAA AGTAACGGCC AGTGGCGTAC CGGCTGCGGG CGTTATGATT
TCGATTCTTT GCCTGATGGC CGGGTCGGTG CTGAACTACA TTATCCCTAA CCCGGAAAAA
GTCTTTGTTT ATGTCTATAG CGCGAGCGTA CTGCCGGGTA TGGTACCGTG GTTTGTGGTG
TTGATTAGCC AACTGCGTTT TCGTGAACAG CATCGTGCCG CGCTGGCCGC ACATCCGTTT
AAATCGATAT TGTTCCCGTG GGTAAACTAC CTGACGATGG CGTTTTTGCT GTGTGTGCTG
GTAGGCATGT ACATCAATAT CGATACGCGG ATGTCTTTGT TGGTCGGTAT CGCCTTTTTA
GCCGTGGTCA GCCTGTGTTA TTTCGCTCTG GGATTAGGTA AAAAAACGTC GCTGGCAGGC
GGTAAATCGT AG
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| Protein sequence | MAEDVKQEKL HRGLEARHIE LIALGGTIGV GLFMGAASAL KWAGPSVLLA YIVAGIFVFF
IMRSMGEMLY LEPVAGSFAV YAHKYMNPFF GYLTAWGYWF MWMAVGISEI TAIGVYVQYW
FPDLPQWIPA IAAVALVAGA NLAAVRLYGE IEFWFAMIKI TTIVVMIIVG VGIIFFGFGN
HGQATGFSNL TEHGGFLAGG WKGLLFALCL VVASYQGVEL VGITAGEAKN PQVTLKRAIN
NILWRILIFY VGAIFVIVTI FPWNEIGTSG SPFVLTFAKI GITAAAGIIN FVVLTAALSG
CNSGMYSCGR MLYSLANNRQ LPAWLGKVTA SGVPAAGVMI SILCLMAGSV LNYIIPNPEK
VFVYVYSASV LPGMVPWFVV LISQLRFREQ HRAALAAHPF KSILFPWVNY LTMAFLLCVL
VGMYINIDTR MSLLVGIAFL AVVSLCYFAL GLGKKTSLAG GKS
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