| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_3994 |
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| Symbol | |
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| ID | 8134981 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | - |
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| Start bp | 4506891 |
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| End bp | 4507574 |
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| Gene Length | 684 bp |
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| Protein Length | 227 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 644867301 |
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| Product | polar amino acid ABC transporter, inner membrane subunit |
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| Protein accession | YP_003019545 |
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| Protein GI | 253690355 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0765] ABC-type amino acid transport system, permease component |
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| TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.320877 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGTATTAC TCATGAATAT CGATCTTGCC TACCTGTTAA AGGTCTTTCC CCAGGTATTA
ATGTATTTGC CGACCACGCT GTTTCTTGCC GTGGTTTCGA TGTTTTTTGC TATGGTTCTC
GGCCTTATCC TGGCGTTAGT CCGTGAAAGC AAGATCGTCG TCGTGGTAAA AATCGTTGAA
CTGTATATCT CGCTGTTCCG CGGTATTCCG TCGCTGGTTC AGTTATTTAT TATCTATTTC
GGCCTGCCGC AGCTGTTCCC CGGATTATCC AATCTGGATG CCATGACGGC GGCGATTATC
GGTTTTAGTC TGAAAACGTC CGCCTATATG GCAGAAATCT TCCGTGCGGG CCTGTCCTCG
GTGGATTTCG GCCAGACGGA AGCGGGTTTA TCGATTGGTA TGAGCAAAGC GCAGGTCTAT
CGCCGCATCG TGTTGCCTCA GGCCATGTTG AATGCGCTGC CTGCGACGGG GAATACCTTT
ATTTCCCTGA TTAAAGATAC CTCGGTGGCC TTTGCGCTGG GTGTCTCCGA ACTGTTCGCG
GAAGGCAAGA TGATTGCCGC CGAATCTCTG CGTTTCTTTG AGACCTTCCT GGTTGTGGGT
CTGATTTACT GGTTGGTGAT CATTGTTTAT TCCTGGCTGC AAAAACAGCT GGAGAAGAAA
CTGAATCACT CGCTACAGCG ATAA
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| Protein sequence | MVLLMNIDLA YLLKVFPQVL MYLPTTLFLA VVSMFFAMVL GLILALVRES KIVVVVKIVE
LYISLFRGIP SLVQLFIIYF GLPQLFPGLS NLDAMTAAII GFSLKTSAYM AEIFRAGLSS
VDFGQTEAGL SIGMSKAQVY RRIVLPQAML NALPATGNTF ISLIKDTSVA FALGVSELFA
EGKMIAAESL RFFETFLVVG LIYWLVIIVY SWLQKQLEKK LNHSLQR
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