| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_3988 |
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| Symbol | |
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| ID | 8134975 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | + |
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| Start bp | 4500482 |
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| End bp | 4501534 |
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| Gene Length | 1053 bp |
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| Protein Length | 350 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 644867295 |
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| Product | extracellular solute-binding protein family 3 |
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| Protein accession | YP_003019539 |
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| Protein GI | 253690349 |
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| COG category | [E] Amino acid transport and metabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
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| TIGRFAM ID | [TIGR01096] lysine-arginine-ornithine-binding periplasmic protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTGAGAA AACTACTCTC GTTGACGACC GCCACAGCGC TGACTTTAGG GGGACTTCTG
CTGCCCGTCG CACACGCTAA TGCCGCTGAT GCAGGAAATG GCGAAACGCT CAAAAAAATC
AAAGCACGCG GTGAACTGGT GTGCGGTGTG CACCCAGCGC GCCACGGCTT TTCCGCGATT
GATAGCAAAG GACAGTGGAC CGGGCTGGAC GTCGATTATT GCCGTGCATT AGCGGCCGCT
GTGTTTGGCG ATGCGAATAA AGTACGCTTT GCCGCCCTTT CCACCGCACA GCGCTTCCCC
GCGATTCAGT CTGGTGAAGT GGACGTGCTG TCACGCAATA TCACCGCTGA TTTGTCTCGC
GATACGTCGC TGGGGCTGAA CTTCGCGCCG CCGACCTTCT ATACCGGTAC GGGCTTCATG
GTGCGCACCA GCGCCAACGT GAAAAAGGTT GAAGATCTGG ACGGCGCGAC CGTCTGCATC
ACACCGGGCA GCAGCACCGA ACGTAACGTC GCGCAGATTT TTGCCTCACG CAACCTGCAT
TACACTCCGG TGGTTATCGA GAACAATAAA GAGTATGTCG CGGCCTACCT GTCTGGACGC
TGCGACGTCA TTGCCCGCGA TAAAGTCGCC CTGCCCGGCG TGCGCACCTT TGATGCGGAA
AAACCATCCG ACCATGTGAT TCTGCCGGGG ATTTACTCAA AAGAGCCGCT GGCGATGGCG
GTTCGTCAGG GTGACGACCA GTGGTACGAC ATTGTGAAAT GGGTGGTTTA CGCCACATTC
AACGCGGAAG AGATGGAAAT CGGTCAACAG AACGTAGACA GCAAGCTCAA GTCGACAGAC
CCGGATATAC AGGCGCTGCT TGGGGTCACT GGCGATTACG GTCAGAAACT GGGATTGAGT
AACCAGTGGG CTTACAACGT GATTAAGCAG GTCGGGAATT ACAGCGATAT TTATAACCGC
CACTTCGGGC CAGATACCCC AGCACCGCTG GAGCGCGACC TGAATAATCT CTGGACGAAA
GGCGGTTTGC TCTACGGTCT GCCCATTCGT TAA
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| Protein sequence | MLRKLLSLTT ATALTLGGLL LPVAHANAAD AGNGETLKKI KARGELVCGV HPARHGFSAI
DSKGQWTGLD VDYCRALAAA VFGDANKVRF AALSTAQRFP AIQSGEVDVL SRNITADLSR
DTSLGLNFAP PTFYTGTGFM VRTSANVKKV EDLDGATVCI TPGSSTERNV AQIFASRNLH
YTPVVIENNK EYVAAYLSGR CDVIARDKVA LPGVRTFDAE KPSDHVILPG IYSKEPLAMA
VRQGDDQWYD IVKWVVYATF NAEEMEIGQQ NVDSKLKSTD PDIQALLGVT GDYGQKLGLS
NQWAYNVIKQ VGNYSDIYNR HFGPDTPAPL ERDLNNLWTK GGLLYGLPIR
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