| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_3981 |
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| Symbol | hemD |
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| ID | 8134968 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | + |
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| Start bp | 4492025 |
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| End bp | 4492765 |
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| Gene Length | 741 bp |
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| Protein Length | 246 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 644867288 |
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| Product | uroporphyrinogen-III synthase |
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| Protein accession | YP_003019532 |
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| Protein GI | 253690342 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG1587] Uroporphyrinogen-III synthase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.000864571 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGACAATTC TGGTTACCCG TCCGTCACCA ACTGGCGAAC AACTGGTGAC CCGTTTAAGA
AAGCTTGGCT ATAACGCCTG GCACAGCCCG CTGATCGAGT TTTCACCCGG ACGAGAACTT
GCCAGCTTGC CAGCACTATT ACAGACGCTG CGCGCCGACG ATCTGGTGTT TGCGCTCTCA
CAACATGCGA TTCATTACGC CGATCCAATG CTGGCGCGTG CGGGCATCGG TTGGCCTGCC
CATCTCGCTT ATTATGCGAT TGGTCGCACC ACGGCACTGG CGCTGCATAA AACCAGCGCC
CATCCGGTCA TCTACCCTCC CGAACGCGAA ACCAGCGAAA CGCTCCTGCA ACTACCTGAA
CTGCAAAATA TTTCCGGCAA GCGCGCACTA TTACTGCGCG GCAACGGCGG CAGGGAATTG
CTGGGAGAAA CGCTAACCGA ACGCGGCGTG CAGGTGACCT ACTGCGAATG CTATCAGCGC
AGAGACGTTC ATTATGATGG GCCGGAGCAA AGCCGCCACT GGCAACAAAT AGGCATCGAC
AAACTGGTGA TCACCAGCGG AGAAATGCTA CAACGGATCT ATACTTTAGT ACCTGATTAC
TATCGGGCTT CCTGGTTACT CGGCTGCCGC TTGATCGTCG TCAGTGAACG ACTGGCAGAA
CAGGCTCGTC AGCTTGGCTG GCGCGATATC CGGGTCGCCG ATAACGCCGA TAACGATGCG
CTCGTGCGCG CACTACAATA A
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| Protein sequence | MTILVTRPSP TGEQLVTRLR KLGYNAWHSP LIEFSPGREL ASLPALLQTL RADDLVFALS
QHAIHYADPM LARAGIGWPA HLAYYAIGRT TALALHKTSA HPVIYPPERE TSETLLQLPE
LQNISGKRAL LLRGNGGREL LGETLTERGV QVTYCECYQR RDVHYDGPEQ SRHWQQIGID
KLVITSGEML QRIYTLVPDY YRASWLLGCR LIVVSERLAE QARQLGWRDI RVADNADNDA
LVRALQ
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