| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_3977 |
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| Symbol | cyaY |
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| ID | 8134964 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | + |
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| Start bp | 4487173 |
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| End bp | 4487493 |
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| Gene Length | 321 bp |
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| Protein Length | 106 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 644867284 |
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| Product | frataxin-like protein |
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| Protein accession | YP_003019528 |
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| Protein GI | 253690338 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1965] Protein implicated in iron transport, frataxin homolog |
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| TIGRFAM ID | [TIGR03421] iron donor protein CyaY |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.114453 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAACGATA GCGAGTTCCA CCAATTAGCC GACGAACTCA TGCTTCAGTT GGAAGAAACG
CTGGATCGGT TTGAGGGTGA TGCCGACATC GATTACGAAA CCAACGGCGG CGTGATGACG
CTAAGTTTTG AAAACGGCAG CAAAATCGTG ATTAATCGGC AGGAACCGTT GCACCAAATC
TGGCTGGCGA CCAAAGCAGG CGGTTACCAC TTCAATCGTC AGGAAACACG CTGGATATGC
GATCGTAGCG GTGAAGACTT TATCACGCTG TTGTCATCTG CCTGTTCGAC TCAGGCCGGG
GAAACCGTTC GCTTCGAGTA A
|
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| Protein sequence | MNDSEFHQLA DELMLQLEET LDRFEGDADI DYETNGGVMT LSFENGSKIV INRQEPLHQI
WLATKAGGYH FNRQETRWIC DRSGEDFITL LSSACSTQAG ETVRFE
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