Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PC1_3973 |
Symbol | xerC |
ID | 8134960 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
Kingdom | Bacteria |
Replicon accession | NC_012917 |
Strand | - |
Start bp | 4484393 |
End bp | 4485328 |
Gene Length | 936 bp |
Protein Length | 311 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 644867280 |
Product | site-specific tyrosine recombinase XerC |
Protein accession | YP_003019524 |
Protein GI | 253690334 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG4973] Site-specific recombinase XerC |
TIGRFAM ID | [TIGR02224] tyrosine recombinase XerC |
| 

|
Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.556004 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAGCCGAC AGCCTGCGTC GCCGGAGGCT CCTTCTTCTT CGCTCTTACA AGCCGATGTT GATGCTTTCC TGCGCTATCT GAAAGTGGAG CGTCAGCTTA GTCCGCTCAC GCAGACCAGC TATTTGCGCC AACTGTCCGC GATTATCACG ATACTCTCCG CGGCGGGTGT GGTTGACTGG CGTAAGCTGG ACGCCGCTGG CGTACGTTCC GTGGTGTCCC GCAGCAAGCG TGATGGACTG CATTCAGGCA GTTTGGCACT GCGCCTATCG GCATTACGCA GCTTTCTCGA CTGGATGGTG TCACGCGGTG TCCTGACGGC GAACCCGGCG AAAGGAATAT CCACGCCGAG AGCCGGACGT CCATTACCCA AGAATATGGA TGTGGATGAG ATGGATCGTC TGCTGGATAT CGATCTGGAC GATCCCCTCG CGGTGCGCGA CCGCACGATG CTGGAAGTGA TGTACGGCGC GGGGCTGCGT CTGGCGGAAC TGGTCGGTAT GGACTGTCAG CATATCGATC TGGCAAGCGG TGAAGTTTGG GTCATGGGAA AAGGCAGTAA AGAGCGCAAA TTGCCGATAG GAAAAACGGC GGTAACCTGG CTGGAACGCT GGCTGGCGCT GCGTGAATTG TTTGGCCCAC AGGATGATGC CGTGTTTATC TCCAATCAGG GGCGACGCAT CTCGATGCGT AACGTACAGA AGCGTTTTGC CGAGTGGGGG ATTAAGCAGG GTGTGAATAG CCATGTTCAT CCGCACAAGC TGCGCCACTC TTTTGCGACG CACATGCTGG AATCCAGCGG GGATTTACGA GCGGTCCAAG AGCTGCTTGG CCATGCCAAC TTGTCCACGA CACAGATCTA CACCCATCTT GATTTTCAAC ATTTAGCCTC CGTGTACGAT GCTGCGCATC CACGCGCCAA ACGAGGGAAA CCCTGA
|
Protein sequence | MSRQPASPEA PSSSLLQADV DAFLRYLKVE RQLSPLTQTS YLRQLSAIIT ILSAAGVVDW RKLDAAGVRS VVSRSKRDGL HSGSLALRLS ALRSFLDWMV SRGVLTANPA KGISTPRAGR PLPKNMDVDE MDRLLDIDLD DPLAVRDRTM LEVMYGAGLR LAELVGMDCQ HIDLASGEVW VMGKGSKERK LPIGKTAVTW LERWLALREL FGPQDDAVFI SNQGRRISMR NVQKRFAEWG IKQGVNSHVH PHKLRHSFAT HMLESSGDLR AVQELLGHAN LSTTQIYTHL DFQHLASVYD AAHPRAKRGK P
|
| |