| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_3973 |
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| Symbol | xerC |
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| ID | 8134960 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | - |
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| Start bp | 4484393 |
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| End bp | 4485328 |
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| Gene Length | 936 bp |
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| Protein Length | 311 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 644867280 |
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| Product | site-specific tyrosine recombinase XerC |
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| Protein accession | YP_003019524 |
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| Protein GI | 253690334 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4973] Site-specific recombinase XerC |
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| TIGRFAM ID | [TIGR02224] tyrosine recombinase XerC |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.556004 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAGCCGAC AGCCTGCGTC GCCGGAGGCT CCTTCTTCTT CGCTCTTACA AGCCGATGTT
GATGCTTTCC TGCGCTATCT GAAAGTGGAG CGTCAGCTTA GTCCGCTCAC GCAGACCAGC
TATTTGCGCC AACTGTCCGC GATTATCACG ATACTCTCCG CGGCGGGTGT GGTTGACTGG
CGTAAGCTGG ACGCCGCTGG CGTACGTTCC GTGGTGTCCC GCAGCAAGCG TGATGGACTG
CATTCAGGCA GTTTGGCACT GCGCCTATCG GCATTACGCA GCTTTCTCGA CTGGATGGTG
TCACGCGGTG TCCTGACGGC GAACCCGGCG AAAGGAATAT CCACGCCGAG AGCCGGACGT
CCATTACCCA AGAATATGGA TGTGGATGAG ATGGATCGTC TGCTGGATAT CGATCTGGAC
GATCCCCTCG CGGTGCGCGA CCGCACGATG CTGGAAGTGA TGTACGGCGC GGGGCTGCGT
CTGGCGGAAC TGGTCGGTAT GGACTGTCAG CATATCGATC TGGCAAGCGG TGAAGTTTGG
GTCATGGGAA AAGGCAGTAA AGAGCGCAAA TTGCCGATAG GAAAAACGGC GGTAACCTGG
CTGGAACGCT GGCTGGCGCT GCGTGAATTG TTTGGCCCAC AGGATGATGC CGTGTTTATC
TCCAATCAGG GGCGACGCAT CTCGATGCGT AACGTACAGA AGCGTTTTGC CGAGTGGGGG
ATTAAGCAGG GTGTGAATAG CCATGTTCAT CCGCACAAGC TGCGCCACTC TTTTGCGACG
CACATGCTGG AATCCAGCGG GGATTTACGA GCGGTCCAAG AGCTGCTTGG CCATGCCAAC
TTGTCCACGA CACAGATCTA CACCCATCTT GATTTTCAAC ATTTAGCCTC CGTGTACGAT
GCTGCGCATC CACGCGCCAA ACGAGGGAAA CCCTGA
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| Protein sequence | MSRQPASPEA PSSSLLQADV DAFLRYLKVE RQLSPLTQTS YLRQLSAIIT ILSAAGVVDW
RKLDAAGVRS VVSRSKRDGL HSGSLALRLS ALRSFLDWMV SRGVLTANPA KGISTPRAGR
PLPKNMDVDE MDRLLDIDLD DPLAVRDRTM LEVMYGAGLR LAELVGMDCQ HIDLASGEVW
VMGKGSKERK LPIGKTAVTW LERWLALREL FGPQDDAVFI SNQGRRISMR NVQKRFAEWG
IKQGVNSHVH PHKLRHSFAT HMLESSGDLR AVQELLGHAN LSTTQIYTHL DFQHLASVYD
AAHPRAKRGK P
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