Gene PC1_3969 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_3969 
Symbol 
ID8134956 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand- 
Start bp4479182 
End bp4480132 
Gene Length951 bp 
Protein Length316 aa 
Translation table11 
GC content53% 
IMG OID644867276 
Productmagnesium/nickel/cobalt transporter CorA 
Protein accessionYP_003019520 
Protein GI253690330 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0598] Mg2+ and Co2+ transporters 
TIGRFAM ID[TIGR00383] magnesium Mg(2+) and cobalt Co(2+) transport protein (corA) 


Plasmid Coverage information

Num covering plasmid clones9 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTGAGCG CATTTAAACT GGATAATTGC CGTTTATCTC GTCTGGAACT GGATGACTCC 
GATGATCTCA CCACGTCAGT TTGGGTCGAT TTGATCGAGC CGGAAGACGA TGAGCGTGAA 
AAAGTACAAA ACGAACTGGG ACAAAGTCTG GCAACCCGTC CAGAACTGGA AGATATCGAA 
GCGTCGGCAC GTTTTTTTGA AGATGAAGAT GGCTTGCATA TTCACTCCTT TTTCTTTTTT 
GAAGATGCTG AGGATCACGC CGGTAACTCC ACGGTGGCGT TTACCATCCG TGATGGCCGC 
CTGTACACCC TGCGCGAGCG TGAATTGCCC GCGTTCCGCC TGTATCGCAT GCGCGCCCGC 
AACCAAACGC TGGTGGACGG TAATGCTTAC GAACTGCTGC TCGACCTCTT TGAGACGAAA 
ATTGAGCAAC TGGCGGACGA AATCGAGAAC ATCTACAGCG ATCTGGAATC ACTAAGCCGC 
ATCATAATGG AAGGGCGGCA GGGTGAAGAG TACGACGAGG CGTTGTCTAC GCTGGCGGAA 
CTGGAAGACG TGGGCTGGAA AGTGCGCCTG TGCCTGATGG ATACCCAACG CGCGTTGAAT 
TTCCTGGTGC GTAAAGCCCG CTTGCCATCC GGCCAGCTGG AGCAGGCGCG CGAAATTTTA 
CGCGATATCG AATCTCTGCT GCCGCACAAC GAATCCCTGT TCCAGAAAGT TAACTTCCTG 
ATGCAGGCGG CGATGGGCTT CATCAACATC GAGCAGAGCC GGATTATCAA GATCTTCTCG 
GTGGTATCCG TGGTGTTCCT GCCGCCGACG CTGGTGGCAT CCAGCTACGG GATGAACTTT 
GAGTTTATGC CGGAGCTGAG ATGGTCGTTT GGCTATCCGG GGGCGATTGT GCTGATGATC 
CTCGCCGGAC TGGCGCCGTA CCTCTACTTT AAACGTAAAA ACTGGCTCTA A
 
Protein sequence
MLSAFKLDNC RLSRLELDDS DDLTTSVWVD LIEPEDDERE KVQNELGQSL ATRPELEDIE 
ASARFFEDED GLHIHSFFFF EDAEDHAGNS TVAFTIRDGR LYTLRERELP AFRLYRMRAR 
NQTLVDGNAY ELLLDLFETK IEQLADEIEN IYSDLESLSR IIMEGRQGEE YDEALSTLAE 
LEDVGWKVRL CLMDTQRALN FLVRKARLPS GQLEQAREIL RDIESLLPHN ESLFQKVNFL 
MQAAMGFINI EQSRIIKIFS VVSVVFLPPT LVASSYGMNF EFMPELRWSF GYPGAIVLMI 
LAGLAPYLYF KRKNWL