| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_3963 |
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| Symbol | |
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| ID | 8134950 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | - |
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| Start bp | 4472624 |
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| End bp | 4473247 |
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| Gene Length | 624 bp |
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| Protein Length | 207 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 644867270 |
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| Product | threonine efflux system |
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| Protein accession | YP_003019514 |
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| Protein GI | 253690324 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1280] Putative threonine efflux protein |
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| TIGRFAM ID | [TIGR00949] The Resistance to Homoserine/Threonine (RhtB) Family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.245678 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCTGATGC TATTTCTGAC GGTGGCGCTG GTGCATTTCA TTGCGCTGAT GAGCCCAGGG
CCGGATTTCT TTTTTGTTTC ACAAACCGCG GCCAGCCGTT CCCGCCGTGA AGCGATGATG
GGTGTGCTGG GTATTTCTTT GGGCGTGGTG GTCTGGGCGG CTATCGCGCT GCTGGGGCTG
CATCTGCTGT TGCAAAAAAT GGCCTGGCTG CATACCGCCA TTACGGTCGG CGGCGGGCTG
TATCTGTGCT GGATGGGCTG GCAGATGCTG CGCTCCGCAC GGCGTAAAGC ACAGTTGGAA
ACCACGCAGG AAACGGCGGT AGTCTTGCCT CAGCGTGGTA AAACCTTTAT GCGTGGGCTA
TTGACGAATC TGGCTAACCC GAAGGCGCTG ATCTATTTCG GCAGCGTGTT CTCGCTGTTT
GTTGGCGATA GCGTCGGCAG CGGTGCCCGC TGGGGACTGT TCGCGCTGAT CTCGATTGAA
ACGCTGATCT GGTTCAGCCT GGTCGCGATG GTTTTCGCCT TGCCGGCAAT GCGTCGCGGC
TATCAGCGTC TGGCAAAATG GGTGGATGGC GTAGCGGGCG TGCTGTTTAC CGGTTTCGGC
CTGCACCTGA TTTTCTCTCG TTAA
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| Protein sequence | MLMLFLTVAL VHFIALMSPG PDFFFVSQTA ASRSRREAMM GVLGISLGVV VWAAIALLGL
HLLLQKMAWL HTAITVGGGL YLCWMGWQML RSARRKAQLE TTQETAVVLP QRGKTFMRGL
LTNLANPKAL IYFGSVFSLF VGDSVGSGAR WGLFALISIE TLIWFSLVAM VFALPAMRRG
YQRLAKWVDG VAGVLFTGFG LHLIFSR
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