| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_3952 |
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| Symbol | |
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| ID | 8134939 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | - |
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| Start bp | 4457814 |
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| End bp | 4458989 |
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| Gene Length | 1176 bp |
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| Protein Length | 391 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 644867259 |
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| Product | glycosyl hydrolase family 88 |
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| Protein accession | YP_003019503 |
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| Protein GI | 253690313 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4225] Predicted unsaturated glucuronyl hydrolase involved in regulation of bacterial surface properties, and related proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGACCA TTCTTGAGCC ACTAGATGCG CGCTACGAGG CATCTCACCC CCCACTTTCT
CCGGTATGGC TCAATGATGC CATTCAGGAT GTTTTAAAAA AGCTGGACGA GATGTTGCCG
CGCTTTAGCC ACACATTTCC TGCCGCCAGC GCCAGCAGTG GGCACTATCC GACGGTTGAA
AAGGTCGATT GGACGGAAGG GTTCTGGACC GGCATGTTGT GGCTGGCCTG GGAAGTTACC
GGGGATGATA AATATCGTCA GGTGGCGGAA GGGCTGCTGG ACAGCTTTGA AACGCGTCTG
GATAACCACA TCAAAGTCGA TACCCACGAC TTAGGGTTCC TTTACCTGCT GTCCTGCGTC
AATGCCTGGC GCCTAACCGG CAACGAACGC GCCCGTTCAC TCGCGCTACG TGCTGCGGAA
CTGCTGTATC AGCGTTATAA CGAAACCGCA GGGGTGATAC AGGCATGGGG CGATCTCAGC
GATCCTGCGC GGCAGGGGCG CATGATTATT GATTGTAACC TGAACGTCCC TCTTTTGTTT
TGGGCTGCGA ATGAGACGGG AAATACCGGC TATCGGCAAG CCGCGCAGCG CCATCTTGCT
TTAGCCGCAC GCCATCTGGT CAGAGATGAC GCCTCAACGT TTCATACGTT TTATATGGAT
ATCCGCACCG GACGCCCGCT GCATGGCGAT ACCCATCAGG GATTCAGCGA TGATTCCTGC
TGGTCTCGTG GGCAGGCCTG GGGCATTTAT GGCTTTGCGC TGGGCTTTAA TTATACCGGC
GATGGCGAGC TTCCGGAGCT GTCCCGCAAG CTGGCTCACT ATTTTCTCAA CCGGCTGCCG
GAAGATTATG TCTGTTACTG GGATTTGATC TTTACGCCGC AGGATAACGC GTTTCGAGAT
ACCTCTGCGG CAGCGATTGC CGTATGCGGG CTGGCGGAAC TGCTAAAGCA GTTGCCCATT
ACCGATCCGC TGCGTCCCGC CTATCACCAT GCCATCACGC AGATCGCGCA GAATTTGCGT
CAGCACTATT TCGCTCATCA CACCGATGGG CTGCTGCGCG AAGGTGTTTA TAACTTCGGC
CGCAATATGG GGATTAACGA ACCCAATCTC TGGGGTGATT ACTTTTGGTT TGAAGCCCTG
GTACGCCTTA CCCGAATCTG GACCCCCTAC TGGTAA
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| Protein sequence | MTTILEPLDA RYEASHPPLS PVWLNDAIQD VLKKLDEMLP RFSHTFPAAS ASSGHYPTVE
KVDWTEGFWT GMLWLAWEVT GDDKYRQVAE GLLDSFETRL DNHIKVDTHD LGFLYLLSCV
NAWRLTGNER ARSLALRAAE LLYQRYNETA GVIQAWGDLS DPARQGRMII DCNLNVPLLF
WAANETGNTG YRQAAQRHLA LAARHLVRDD ASTFHTFYMD IRTGRPLHGD THQGFSDDSC
WSRGQAWGIY GFALGFNYTG DGELPELSRK LAHYFLNRLP EDYVCYWDLI FTPQDNAFRD
TSAAAIAVCG LAELLKQLPI TDPLRPAYHH AITQIAQNLR QHYFAHHTDG LLREGVYNFG
RNMGINEPNL WGDYFWFEAL VRLTRIWTPY W
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