| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_3942 |
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| Symbol | |
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| ID | 8134929 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | - |
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| Start bp | 4446719 |
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| End bp | 4448095 |
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| Gene Length | 1377 bp |
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| Protein Length | 458 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 644867249 |
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| Product | gluconate transporter |
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| Protein accession | YP_003019493 |
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| Protein GI | 253690303 |
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| COG category | [E] Amino acid transport and metabolism
[G] Carbohydrate transport and metabolism |
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| COG ID | [COG2610] H+/gluconate symporter and related permeases |
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| TIGRFAM ID | [TIGR00791] gluconate transporter |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACAGAAA TAACATCCGC CTATAGCGCC AGTGTGCTAT TAACCATCGC CGCAGGCGCA
GTCGCACTGT TACTGGTGTT GATTATGCGC TTTAAAGTGC ATGCTTTTCT GGCTTTGACA
CTGGTAAGTT TGGTCACTGC TCTGGTGACG AAAACTCCAT ACGAGAAGAT TGTCCCCACG
TTGCTCAGTG GCTTCGGTAG TACGCTGGCT TCTGTTGCTC TGCTGGTTGG TTTGGGAGCA
ATGATTGGCC GTTTGCTGGA AGTCACTGGC GGCGCGAAGG TATTGGCTGA TACGCTGATC
AACAAGTTCG GTGAACAGCG AGCACCCTTT GCGCTCGGTA TTGCTTCACT GCTCTTTGGC
TTCCCGATCT TCTTTGATGC GGGTTTGGTT GTCATGCTGC CGATTATTTT CAGCGTAGCA
AAACGCTTTG GTGGTTCGAC ATTAAAATAT GCCTTCCCCG CTGCGGGTGC TTTTGCTGCT
ATGCACGCGT TAGTGCCGCC ACATCCCGGT CCGGTTGCGG CCAGTGAATT ACTGGGTGCC
AATATTGGCC TGTTAGTGAT TATCGGTGGC CTTATTGCGT TACCCACCTG GTATTTCGGC
GGTTATCTCT ATGGGTTATA CGCAGGTAAA AAATTCGATA TCAAGCTGCC TTCGAGCTTC
TTGTCTGCGG TTGAAACGGA TACGAGCGTT AAGCCACCGC GTTTTTCCGT GGTGCTGAGC
ATCCTGCTGC TACCACTGGT GCTGATTTTT CTCGATACCG GACTCAATAC GTTAACGGTA
ATGGGCATTG TCAGCGGTGA CAGTGGACTG GTGCAGTTCT TGCGTATGTT GGGTAAAACG
CCGATTGCAT TACTGATCAC GGTGTTTTTT GCGTTGATGG TCTTTAGTGG TGATAAGAGC
CGCTCACACC TTGAAAAAAT CTGTGATGGG GCGCTAGGGC CGATTTGTTC GATTATCCTG
GTAACCGGCG CAGGCGGTAT GTTCGGTGGT GTGCTGCGTG CCAGCGGGAT TGGTAATGCT
TTGGCTGGCG CACTGGCGGA TACGGGGATG CCAGTGATTG TTGCTGCATT TGTTGTGTCT
GCGGCACTGC GTGTGGCGCA GGGGTCGGCG ACGGTGGCGC TGACGACGAC GGCGGCGCTG
ATGGCACCCA CCGTGGCGGC GACCACGGGC TTAAGTCAGT TTGACCTGTG CTTTATTGTG
GTAGCAATTG CGGGTGGTGC GACCGTGCTG TCGCATGTGA ACGATTCTGG CTTCTGGCTG
GTGAGTCGTT TCCTTGAGAT GGATGAGAAA ACGACCCTGA AAACCTGGAC GGTAATGGAA
ACGTTGCTCG GGACTATCGC CTTCTTGCTG GCGGTAATCG GCAGTATTTT GCTCTGA
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| Protein sequence | MTEITSAYSA SVLLTIAAGA VALLLVLIMR FKVHAFLALT LVSLVTALVT KTPYEKIVPT
LLSGFGSTLA SVALLVGLGA MIGRLLEVTG GAKVLADTLI NKFGEQRAPF ALGIASLLFG
FPIFFDAGLV VMLPIIFSVA KRFGGSTLKY AFPAAGAFAA MHALVPPHPG PVAASELLGA
NIGLLVIIGG LIALPTWYFG GYLYGLYAGK KFDIKLPSSF LSAVETDTSV KPPRFSVVLS
ILLLPLVLIF LDTGLNTLTV MGIVSGDSGL VQFLRMLGKT PIALLITVFF ALMVFSGDKS
RSHLEKICDG ALGPICSIIL VTGAGGMFGG VLRASGIGNA LAGALADTGM PVIVAAFVVS
AALRVAQGSA TVALTTTAAL MAPTVAATTG LSQFDLCFIV VAIAGGATVL SHVNDSGFWL
VSRFLEMDEK TTLKTWTVME TLLGTIAFLL AVIGSILL
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