| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_3934 |
|---|
| Symbol | glgA |
|---|
| ID | 8134921 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012917 |
|---|
| Strand | - |
|---|
| Start bp | 4434676 |
|---|
| End bp | 4436115 |
|---|
| Gene Length | 1440 bp |
|---|
| Protein Length | 479 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 644867241 |
|---|
| Product | glycogen synthase |
|---|
| Protein accession | YP_003019485 |
|---|
| Protein GI | 253690295 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0297] Glycogen synthase |
|---|
| TIGRFAM ID | [TIGR02095] glycogen/starch synthases, ADP-glucose type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGGGTCT TACATGTTTG TTCAGAGCTC TTTCCACTGT TGAAAACGGG TGGACTGGCG
GATGTGGCTG GTGCGTTGCC CGGCGCGCAG ATTGCGGCGG GGATGGATGT CCGCGTCATC
CTGCCTGCTT TCCCCGATCT GAAAAAAGGC ATCGCCAACC TACAGGTTGT GCGTGAGCTG
GATACCTTCG CCGGACACGT CACGCTGCTG TTCGGCCATT TTAACGGCGT CGGTATTTAT
TTGATTGATG TGCCCGAACT GTATGAACGC GCGGGCAGCC CTTACCACGA TCCGGCGCTT
TACGCCTATG CCGATAACTA TCTGCGATTC GCGCTGCTGG GGTGGATGGG ATGCGAAATG
GCGTGCGGTC TGGACCACTA TTGGCGGCCC GATATCGTGC ATGCCCATGA CTGGCACGCG
GGGCTGACCT GCGCCTATCT GGCGGCGCGT AACCGTCCGG CGAAATCGAT CTTTACCGTT
CACAACCTTG CCTATCAGGG GCTGTTTGAT GCCCGGCATA TGCCGGATCT CCACCTGCCG
AGAGAGTTCT TTCAGGTGTA CGGGCTGGAG TTTTACGGCC AGATTTCCTA CCTCAAAGCA
GGATTGTACT ACGCTGACCA TATTACGACC GTGAGCCCGA CCTACGCGCA TGAGATTACG
CTGCCAGCGT ATGGTTACGG TATGGAAGGT TTACTGAAGT CGCGTGAAGA GGAAGGACGA
CTGTCCGGAA TCCTCAATGG CGTAGACGAG ATGATTTGGA ATCCAGCGCA CGATCCTTTA
CTCGCTAGCC ATTACAGCCG CGATACGCTG GCGAACAAGG CCGAAAATAA ACGGCGTTTG
CAAACGGCAA TGGGCTTGAA GGTTGACGAC AAGGTGCCGG TTTTTGCCAT CGTCAGCCGT
CTGACCAGCC AGAAAGGGCT CGATATTGCG CTAAGCGCGA TACCGGATCT GCTGGAACAG
GGCGGGCAAG TGGTGGTACT GGGCGCAGGA GATGCCGATT TGCAGGAGGG CTTTCTGGCG
GCGGCGGCTG AATATCACGG TCAGGTTGGG GTACAGATTG GTTATCACGA GGCCTTCTCG
CACCGCATTA TTGGCGGCGC GGATGTCATC ATGGTGCCTA GCCGGTTTGA GCCTTGTGGG
TTAACGCAGC TCTATGGCTT GAAATATGGC ACGTTGCCGC TGGTGCGCCG TACTGGCGGG
CTGGCGGATA CGGTATCAGA CTGCTCGCTG GAGAATCTGG CGGATGGGCT GGCAAGCGGG
TTTGTCTTTA ACGATTGCAG CGTGGGATCG CTATCCCGCG CGATTCGTCG TGTGTTTGTG
CTGTGGTCTC GGCCTACGCT ATGGCGCTAT GTGCAGCGTC AGGCGATGGC GATGGACTTT
GGTTGGCAGG TTGCTGCTCA GGCTTATGGT GCGCTCTATC AACGCTTGTA TACCCACTAG
|
|---|
| Protein sequence | MRVLHVCSEL FPLLKTGGLA DVAGALPGAQ IAAGMDVRVI LPAFPDLKKG IANLQVVREL
DTFAGHVTLL FGHFNGVGIY LIDVPELYER AGSPYHDPAL YAYADNYLRF ALLGWMGCEM
ACGLDHYWRP DIVHAHDWHA GLTCAYLAAR NRPAKSIFTV HNLAYQGLFD ARHMPDLHLP
REFFQVYGLE FYGQISYLKA GLYYADHITT VSPTYAHEIT LPAYGYGMEG LLKSREEEGR
LSGILNGVDE MIWNPAHDPL LASHYSRDTL ANKAENKRRL QTAMGLKVDD KVPVFAIVSR
LTSQKGLDIA LSAIPDLLEQ GGQVVVLGAG DADLQEGFLA AAAEYHGQVG VQIGYHEAFS
HRIIGGADVI MVPSRFEPCG LTQLYGLKYG TLPLVRRTGG LADTVSDCSL ENLADGLASG
FVFNDCSVGS LSRAIRRVFV LWSRPTLWRY VQRQAMAMDF GWQVAAQAYG ALYQRLYTH
|
|---|
| |