| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_3929 |
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| Symbol | |
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| ID | 8134916 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | - |
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| Start bp | 4428228 |
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| End bp | 4428986 |
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| Gene Length | 759 bp |
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| Protein Length | 252 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 644867236 |
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| Product | DNA-binding transcriptional repressor GlpR |
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| Protein accession | YP_003019480 |
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| Protein GI | 253690290 |
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| COG category | [G] Carbohydrate transport and metabolism
[K] Transcription |
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| COG ID | [COG1349] Transcriptional regulators of sugar metabolism |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAAGCAGA CACAACGGCA TGACGCCATT ATTGAACTGG TGCGTCGGCA GGGGTATGTC
AGTACTGAAG AGCTGGTGGA TCATTTTGCG GTGAGTCCGC AAACCATCCG TCGCGATCTG
AACGATCTGG CCGAACAGAA TAAGATCCAT CGTCACCACG GCGGCGCGGC CTTGCCGTCC
AGTTCAGTGA ACACGGCCTA CCATGACCGT AAAATGATGT GGTCGGACGA AAAAGCGCGC
ATTGCCCGTC GGGTGGCGAG CCAGATTCCA GACGGCGCCA CCTTGTTTAT CGATATCGGC
ACCACGCCTG AAGCGGTGGC CTATGCGCTG ATGCAGCACA AGGATCTGCG CGTGGTCACC
AATAACCTGA ATGTGGCAAC GCTGCTGACG GCAAAAGAGG ATTTTCGTCT GATTTTGGCC
GGTGGTGAAG TGCGTACTCG TGATGGCGGC ATCATGGGTG AAGCAACGCT AGATTTTATC
TCTCAGTTCC GCCTGGATTT CGGCATTTTG GGCATCAGCG GTATTGACAT GGATGGGTCA
TTACTGGAGT TTGATTACCA TGAAGTGCGC ACAAAACGGG CGATTATTGA AAATTCTCGC
TGCGTCATGC TGGTGACGGA TCATTCCAAG TTTGGCCGTA ATGCGATGGT GAATTTGGGC
AACATGGATT TGATCGACTA TCTTTTTACC GATCAGTCAC CACCGCCCAG CGTACTGAAA
ATCATTGAAC AACATAAGGT ACAGTTGGAG TTGTGTTGA
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| Protein sequence | MKQTQRHDAI IELVRRQGYV STEELVDHFA VSPQTIRRDL NDLAEQNKIH RHHGGAALPS
SSVNTAYHDR KMMWSDEKAR IARRVASQIP DGATLFIDIG TTPEAVAYAL MQHKDLRVVT
NNLNVATLLT AKEDFRLILA GGEVRTRDGG IMGEATLDFI SQFRLDFGIL GISGIDMDGS
LLEFDYHEVR TKRAIIENSR CVMLVTDHSK FGRNAMVNLG NMDLIDYLFT DQSPPPSVLK
IIEQHKVQLE LC
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