| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_3925 |
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| Symbol | |
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| ID | 8134912 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | + |
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| Start bp | 4422159 |
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| End bp | 4422860 |
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| Gene Length | 702 bp |
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| Protein Length | 233 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 644867232 |
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| Product | gluconate periplasmic binding protein |
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| Protein accession | YP_003019476 |
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| Protein GI | 253690286 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1040] Predicted amidophosphoribosyltransferases |
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| TIGRFAM ID | [TIGR00201] comF family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTTAACCA TCTCCGCACG CTGCTGGCTA TGCTTATTAC CGCTTCATCA CGGCCAGCAG
GGGATATGCT CATACTGCCA GCGCCATTTG CCGCGTTTAC CTGCCTGCTG CCCACGCTGT
GGTTTACCCT CTGGCGACAC AACGCGTCAG TGCGGGCGCT GCCTGCAAAA CCCGCCGCCC
TGGCAATCGA TGACCTTTAT CAGCGACTAC GCCCCGCCGC TTAACACGCT GCTGAAACAT
TTTAAATTTC ACGGTAAAAC CGAGCTGGCA GCGGTATTCG CCCGACAGCT GTTACTGCGC
TGGCAGATGG CCTATCGCGA AAGAAAACTC ACCGGACAGG TTCCCCTGTT CCGCCCCGAT
CGCCTGTTCA CCGTGCCCCT GCACCGAAAC CGCCAGTGGC GTCGTGGCTT CAACCAGACC
GAACTGCTCG CCCGTCCTCT CGCCCGCTGG CTGAACTGTG CTTACGATCC CCGCGAATTG
CTGCGAACCC GTCGCACGCC GCTACAGCAA ACGCTCAGCG CCAGCGCGCG GCGGCGCAAC
CTGCGGGGCG CATTTTCCTG TGATGTTTCG CTGTCTGGGC AGCAGGTGGT TTTGCTGGAT
GATGTGGTCA CGACGGGCAG TACCGCCGCT GAAATCAGCA GGCTACTGTT GGCTCAGGGG
GCAGCGGGCG TTCAGGTCTG GTGTTTGTGC CGAACCTTGT AG
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| Protein sequence | MLTISARCWL CLLPLHHGQQ GICSYCQRHL PRLPACCPRC GLPSGDTTRQ CGRCLQNPPP
WQSMTFISDY APPLNTLLKH FKFHGKTELA AVFARQLLLR WQMAYRERKL TGQVPLFRPD
RLFTVPLHRN RQWRRGFNQT ELLARPLARW LNCAYDPREL LRTRRTPLQQ TLSASARRRN
LRGAFSCDVS LSGQQVVLLD DVVTTGSTAA EISRLLLAQG AAGVQVWCLC RTL
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