Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PC1_3920 |
Symbol | |
ID | 8134907 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
Kingdom | Bacteria |
Replicon accession | NC_012917 |
Strand | - |
Start bp | 4414097 |
End bp | 4415842 |
Gene Length | 1746 bp |
Protein Length | 581 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 644867227 |
Product | Alkaline phosphatase |
Protein accession | YP_003019471 |
Protein GI | 253690281 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1785] Alkaline phosphatase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAGCTC GCTGGTTACT GCCTTTACTG ATTTCTGCTG CGCTGCCAGG AATGGTGCAG GCTCAGGCCA TTTATCCCAT TGACCGCGCC ACCATGTTGG CGGGCGGGAA ATTCGATTTT AAAGTCGAGT TTGATGAAGT ACTCAAGCCG GAAGATATCC GCATTCTGAT CAACGGCAAA GATTACCAGC AGGTGCTGGG CAAAACCGCC TCGTTTGTTG AGCGTGAAGA CGGCGGCAAC GCCTCCACGA TCTGGCTGCG AGACGTAAAC CTGCCAGAAG CAGGCAAATA TGTCGTCGAA GCAGAAGCTA AAGGCAAAAA AACACAGGTG AGCTGGGACG TTTATTCCGC GTCCGGTACG CGTAAAGCCA AGAACGTGAT TCTGTTCATC GGCGATGGCC TGTCCGTTGC GCACCGCACT GGCGCGCGTA TCCTGTCCAA AGGGGTGACG GAAGGGAAAG CGGATGGTCG TCTGGCGATT GATGATCTGC AATATATGGC ATTTGGCGGT ACTTCCAGTA CCGACTCCAT CGCGGCCGAT AGCGCCAACA CCATGAGTGC TTACATGACC GGTCATAAAT CCGGTGTGAA TGCGCTGGGT GTGTACGTCA GCCGTAGCAA AAATTCACTG GATCACCCGA AGCAAGAAAC GCTGGGTGAG CTGCTGACCC GTTCTACCAA AATGTCTGTT GGCGTCGTCA GCGATGCTGA ACTTCAGGAT GCTACGCCAG CTGCGGTCGT CTCGCACACT CGCCGCCGTG CGGATAAAGC TGAAATCGTT GAAATGTTCT ACAACGTGCA GCCTACGGTC ATGCTGGGTG GCGGTTCTGC CTACTTCCTG CCGAAAAGCA CGCCGGGTTC AAAGCGTAAA GACGAAACCA ACTACGTTGA GAAATTCCAG CAGGCGGGTT ATTCACTGGT TACCGATGCG GATTCTCTGA AGAAAAACGC GTCACAGGCC ACCAAACTGC TGGGACTGTT CCACACCGGC AATATGGACG GTGTGATGGA TCGTCGTTTC CTGAAAAATG ACGTTGCCAA GAAATTCCCT AATCAGCCTG ACCTGACTGA AATGACGCAG GCGGCGCTGG ATGTGCTGTC CAAAAACAAA GACGGTTTCT TCCTGATGGT AGAATCCGCG CTGATCGACA AAGCCTCTCA CCCACTGGAT TGGGAGCGTG CGTTTACTAA CACCATCATG CTGGATCAGT CTGTCGCGAT CGCTAAGAAG TTCGTGGAGA AAAACCCAGA TACGATGATT ATCGTAACGG GCGACCATAC ACATGGCCTG TCTATCATTG GTACGGTAGA TGACAGCAAG CCGGGTACCG AGATGCGTGA GAAAGTCGGT GTGTATGAAG ATGCAGGCTA TCCGAACTAT AAAGACGCCA ACAAAGACGG CTACCCGGAT GACCTGAACG TTTCCAAACG TCTGGCTGTG TTCTTCAACA ACTACCCAGA CTATTACGAA ACGTTCCGTC CGAAGCTGGA TGGCCAGTTC GTTCCTGCTA TCAAGAACGA AAAAGATGAA TACGTAGCCA ACAAAGCCTA CGAGAAAGTG CCGGGTGCGG TATTCCGTGA AGGGATCCTG CCACGCTCTT CCGATACCGG CGTTCATGCT GTTGACGATA TGGTGATTCA GGCTAGCGGC CCAGGTGCAG AACGTATCCG TGGTTACATG GAAAACACCG ACCTGTTCCG GGTCATTGTG GACGCGCTTG CGGTGAAACC GCAGGACAAA AAGTAA
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Protein sequence | MKARWLLPLL ISAALPGMVQ AQAIYPIDRA TMLAGGKFDF KVEFDEVLKP EDIRILINGK DYQQVLGKTA SFVEREDGGN ASTIWLRDVN LPEAGKYVVE AEAKGKKTQV SWDVYSASGT RKAKNVILFI GDGLSVAHRT GARILSKGVT EGKADGRLAI DDLQYMAFGG TSSTDSIAAD SANTMSAYMT GHKSGVNALG VYVSRSKNSL DHPKQETLGE LLTRSTKMSV GVVSDAELQD ATPAAVVSHT RRRADKAEIV EMFYNVQPTV MLGGGSAYFL PKSTPGSKRK DETNYVEKFQ QAGYSLVTDA DSLKKNASQA TKLLGLFHTG NMDGVMDRRF LKNDVAKKFP NQPDLTEMTQ AALDVLSKNK DGFFLMVESA LIDKASHPLD WERAFTNTIM LDQSVAIAKK FVEKNPDTMI IVTGDHTHGL SIIGTVDDSK PGTEMREKVG VYEDAGYPNY KDANKDGYPD DLNVSKRLAV FFNNYPDYYE TFRPKLDGQF VPAIKNEKDE YVANKAYEKV PGAVFREGIL PRSSDTGVHA VDDMVIQASG PGAERIRGYM ENTDLFRVIV DALAVKPQDK K
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