Gene PC1_3908 details

Gene Information

• Locus tag: PC1_3908
• Symbol: greB
• ID: 8134895
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pectobacterium carotovorum subsp. carotovorum PC1
• Kingdom: Bacteria
• Replicon accession: NC_012917
• Strand: -
• Start bp: 4398430
• End bp: 4398921
• Gene Length: 492 bp
• Protein Length: 163 aa
• Translation table: 11
• GC content: 50%
• IMG OID: 644867215
• Product: transcription elongation factor GreB
• Protein accession: YP_003019459
• Protein GI: 253690269
• COG category: [K] Transcription
• COG ID: [COG0782] Transcription elongation factor
• TIGRFAM ID: [TIGR01461] transcription elongation factor GreB

Plasmid Coverage information

• Num covering plasmid clones: 15
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TTGAAAACCA ATCTGATTAC CCGTGAGGGG TATGACAAAC TGCGGGCAGA GCACGATCAT 
CTCTGGAATG TAAAGCGCCC GGAAATTACC AAGATTGTTT CCTGGGCGGC CAGCCTGGGG 
GATCGCTCGG AAAATGCAGA CTACACCTAT AACAAACGTT TATTACGCCA GATCGACAGG 
CGTGTACGCT ACCTGAGAAA ATGCCTGACG GAATTGAAGA TTGTTGATTA TTCTCCGCAG 
CAGGATGGCA GCGTATTTTT TGGTGCCTGG GTCGAGATCG AAAATGAGCA AGGGGATGTG 
AAGCGTTTGC GGATTGTCGG TCCGGACGAG ATCTACGGTG ACAATAAAGA CTATATTTCG 
ATCGATTCCC CGATGGCGCG CGCCATGCTG AAAAAAGCGG TTGATGAGGA ATTTACCGTG 
AATACGCCGG ACGGCCCGCG TGAGTGGTTC GTCAATTCGA TTGATTACGT TAAGTCATCA 
TCGACCCGGT AG 

 

Protein sequence

MKTNLITREG YDKLRAEHDH LWNVKRPEIT KIVSWAASLG DRSENADYTY NKRLLRQIDR 
RVRYLRKCLT ELKIVDYSPQ QDGSVFFGAW VEIENEQGDV KRLRIVGPDE IYGDNKDYIS 
IDSPMARAML KKAVDEEFTV NTPDGPREWF VNSIDYVKSS STR