Gene PC1_3894 details

Gene Information

• Locus tag: PC1_3894
• ID: 8134881
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pectobacterium carotovorum subsp. carotovorum PC1
• Kingdom: Bacteria
• Replicon accession: NC_012917
• Strand: +
• Start bp: 4380653
• End bp: 4381063
• Gene Length: 411 bp
• Protein Length: 136 aa
• Translation table: 11
• GC content: 55%
• IMG OID: 644867201
• Product: RNA-binding S4 domain protein
• Protein accession: YP_003019445
• Protein GI: 253690255
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG1188] Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog)

Plasmid Coverage information

• Num covering plasmid clones: 13
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGTGAAAG CTACCGAGCA GGCCGACGAC GCCGTTCGTC TGGATAAATG GCTCTGGGCC 
GCCCGTTTCT ATAAGACCCG GGCTATCGCC CGCGAGATGA TCGACGGCGG CAAAGTCCAC 
TATAACGGGC AACGCGGTAA GCCGAGCAAA CAGGTCGAAC TGAATGCCGA GGTGAAACTG 
CGTCAGGGCA ATGATGAACG CACCGTGATT ATTTTGGCCG TTAGCGGCCA GCGCAGAAGT 
GCGACAGAAG CACAGGCGCT GTATCAGGAA ACGGCTGCAA GCATTGAGAA ACGAGAAAAG 
CTAGCGCAGG CGCGGAAAAT GAATGCGCTA ACGATGCCAC ACCCCGATCG CCGCCCTGAT 
AAAAAAGAGC GCCGCGATCT GATTAAATTT AAATACAGCG ATCAGGAATA A 

 

Protein sequence

MVKATEQADD AVRLDKWLWA ARFYKTRAIA REMIDGGKVH YNGQRGKPSK QVELNAEVKL 
RQGNDERTVI ILAVSGQRRS ATEAQALYQE TAASIEKREK LAQARKMNAL TMPHPDRRPD 
KKERRDLIKF KYSDQE