| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_3893 |
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| Symbol | |
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| ID | 8134880 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | + |
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| Start bp | 4379954 |
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| End bp | 4380640 |
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| Gene Length | 687 bp |
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| Protein Length | 228 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 644867200 |
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| Product | HAD-superfamily hydrolase, subfamily IA, variant 3 |
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| Protein accession | YP_003019444 |
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| Protein GI | 253690254 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1011] Predicted hydrolase (HAD superfamily) |
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| TIGRFAM ID | [TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAATCCCC ACGTTAACTG GCACGACATC GACACCGTGA TACTGGATAT GGATGGCACG
CTGCTCGATC TGGCGTTTGA CAGCTATTTC TGGCTTCAAC TGGTACCGCA GTCGCTCAGT
GAAAAGCGCC ATATCAGCCT TGAGCAGGCA CACCAACTTA TCAAGCACGA GTATCAGGCG
GTTCAGCACA CGCTAAACTG GTATTGCTTC GATTACTGGT CAGAACGTCT CGATCTGGAT
ATCTATCAAA TGACGACGGA TATCGGCACG CGTGCCCGCT TGCGCGATGA CACCACGCCA
TTTTTAACGG CGCTGCGCGA GTGTGGTAAA GAGACGATTC TGCTGACCAA CGCTCATCCA
CACAGTCTGG CGGTAAAAAT CGAACATACC GGGCTGGATC AGCACCTTGA TTTATTACTT
TCCACCCATA CTTATGGGTA TCCGAAAGAG AATCAGCGCT TGTGGCAGGC CGTCCAGCAG
CAAACCGGCT TCGACCCTGC CAGAACATTA TTCGTGGATG ACAGCGAGCC GATTCTGGAT
GCCGCGAAAA CCTTCGGTAT CCATTACTGT CTGGGCGTGC GTAATCCAGA TTCCGGCGAG
CAGGAAAAGG TATTCCTGCA ACATCCGTCA ATGAACGACT ATCTTGCGCT GCTACCCGCC
CTGCGTCACT CCGTTAACGC AGGGTAA
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| Protein sequence | MNPHVNWHDI DTVILDMDGT LLDLAFDSYF WLQLVPQSLS EKRHISLEQA HQLIKHEYQA
VQHTLNWYCF DYWSERLDLD IYQMTTDIGT RARLRDDTTP FLTALRECGK ETILLTNAHP
HSLAVKIEHT GLDQHLDLLL STHTYGYPKE NQRLWQAVQQ QTGFDPARTL FVDDSEPILD
AAKTFGIHYC LGVRNPDSGE QEKVFLQHPS MNDYLALLPA LRHSVNAG
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