Gene PC1_3878 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_3878 
Symbol 
ID8134865 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand
Start bp4364621 
End bp4365325 
Gene Length705 bp 
Protein Length234 aa 
Translation table11 
GC content57% 
IMG OID644867185 
Productphosphoglycolate phosphatase 
Protein accessionYP_003019429 
Protein GI253690239 
COG category[R] General function prediction only 
COG ID[COG0546] Predicted phosphatases 
TIGRFAM ID[TIGR01449] 2-phosphoglycolate phosphatase, prokaryotic
[TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
[TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTGAAT TAACCGCGAT TCGCGGATTG GCTTTTGATT TAGACGGGAC ATTGATTCAC 
AGCGCACCGG GTCTGGCGGC GGCGATCGAT CAGGCGTTAG TGGCGCAGTC GTTGCCTGCG
GCGGGCGAAG CCCGTGTCGC AACCTGGATT GGTAACGGTG CGGACGTGAT GGTGGAACGC
GCGCTGCGCT GGGCTGGCGT TGAGCCAACG GCCGTACGCC ACCAGGAAAC CCGTGAGCGG
TTCGATAGCT ATTATGCACA GACGGTGGAT AGTGGCAGCA CGCTGTTTCC GCAGGTAAAA
GAGACGCTGG CGCAGTTGGC GCAACAGGGC GTGCCGATGG CGGTGGTGAC CAATAAACCC
ACGCCGTTCG TTGCCCCGTT ATTGGCAGGC CTCGGGATTG GCGACTATTT TTCGCTGATC
ATCGGTGGCG ATGACGTCAT TGTGAAAAAG CCTCACCCTG CGCCACTCTA TCTGGTACTC
GGTAAGCTGG GGCTGCGAGC CAGTGAACTG CTCTTCATTG GTGATTCACG CAACGATATT
CAGGCGGCAC AGGCCGCGGG CTGTCGCTGC GTTGGCATGA CGTATGGTTA TAACTACGGT
GAAGCGATCG AGCTGAGTCA GCCAGATGTT GTTCTGGATC GTTTTGCCGA TATTTTGCCT
CTGATCGGGC ATTCTTCTTC ACACAATCAG GAACCCTTAG TATGA
 
Protein sequence
MTELTAIRGL AFDLDGTLIH SAPGLAAAID QALVAQSLPA AGEARVATWI GNGADVMVER 
ALRWAGVEPT AVRHQETRER FDSYYAQTVD SGSTLFPQVK ETLAQLAQQG VPMAVVTNKP
TPFVAPLLAG LGIGDYFSLI IGGDDVIVKK PHPAPLYLVL GKLGLRASEL LFIGDSRNDI
QAAQAAGCRC VGMTYGYNYG EAIELSQPDV VLDRFADILP LIGHSSSHNQ EPLV