| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_3875 |
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| Symbol | |
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| ID | 8134862 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | + |
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| Start bp | 4361123 |
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| End bp | 4361992 |
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| Gene Length | 870 bp |
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| Protein Length | 289 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 644867182 |
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| Product | extracellular solute-binding protein family 3 |
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| Protein accession | YP_003019426 |
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| Protein GI | 253690236 |
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| COG category | [E] Amino acid transport and metabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
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| TIGRFAM ID | [TIGR01096] lysine-arginine-ornithine-binding periplasmic protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.575894 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATCAAAT CAAAACTGAC TCTGCTCGCC TGTTCGCTGT GCATGGCAGG CACGCTGGCC
GCCTCATTCA CCGCCTCAGC GGAAGAGAAG AAATGGACGA CCGTCCGCAT CGCCACCGAA
GGCGCTTACC ACCCGTATAA CTTCACCAAG CCAGATGGCA CGCTGGATGG CATGGAGATC
GAACTGTACA AAGTGCTGTG TAACAACATG CAGGTGAAAT GCGAGATCAT GGTTCAACCG
TTCACCAGCA CCATTCCTGC CCTGAATGCT GGTAAGTTCG ACGCCATCAT TTCTGGTATG
TCCGCTACGG AAAAACGCCG TGAGGTGATC GATTTCAGCC AGCCGTACAC GCAGGCAGGA
CAGACTTTCG CCGTACTGAA ATCCAGCAAA CTCGCTAAAG AATTCCCAGA CGCAGGCCAG
CGTTTCTCCA TTAATCCAGC CGACGAAGCC ACCGCAAAGG CTGAAATTGA GAAGCTGAAA
CCGCTGCTGG AAGGCAAAAC TATTGGTGTA CAGTCCGCCT CTATCGCCAG CGCCTTTTTG
GATAAATATA TGAAAGGCGT GATGAAGGTA CGTGAATATA AAACCACGCA AGAACACGAT
CTGGATCTGA AAGCGGGCCG TGTCGATCTG GTTATCGCTT CCGCGCCTTA CCTGAAAAGC
ATTTCGGAAA AACCGGGCAA TGCCGATATC GTCACGCCGG GGCCACAGTT CATCGGCGGC
ATTTTGGGCA GCGGCTCTTC CGTTGGCCTG CGTAAGAGCG ATCCAGAGCT GAAAGCCATG
TTCGACAAGG CTATCGATCA GGCCAAGCAA GACGGTACGA TCAGAAAACT GAGCGAAAAA
TGGTTCGGCA TGGACACCAC CCCGCTCTAA
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| Protein sequence | MIKSKLTLLA CSLCMAGTLA ASFTASAEEK KWTTVRIATE GAYHPYNFTK PDGTLDGMEI
ELYKVLCNNM QVKCEIMVQP FTSTIPALNA GKFDAIISGM SATEKRREVI DFSQPYTQAG
QTFAVLKSSK LAKEFPDAGQ RFSINPADEA TAKAEIEKLK PLLEGKTIGV QSASIASAFL
DKYMKGVMKV REYKTTQEHD LDLKAGRVDL VIASAPYLKS ISEKPGNADI VTPGPQFIGG
ILGSGSSVGL RKSDPELKAM FDKAIDQAKQ DGTIRKLSEK WFGMDTTPL
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