| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_3873 |
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| Symbol | |
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| ID | 8134860 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | + |
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| Start bp | 4359531 |
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| End bp | 4360265 |
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| Gene Length | 735 bp |
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| Protein Length | 244 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 644867180 |
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| Product | polar amino acid ABC transporter, inner membrane subunit |
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| Protein accession | YP_003019424 |
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| Protein GI | 253690234 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4160] ABC-type arginine/histidine transport system, permease component |
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| TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.839881 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGATTTTC CTTTTCTGTA CGACACGTTT CTGGAGATTA TTCCCGGTAT TCCGCTGACC
CTGCAACTGG CGGTCAGCTC TGTTTTTCTG GGCTTCTTTC TGGCGTTAGG GCTGGCATTG
ATGCAGCTGT CATCCTTTGC CGTGCTGCGC TCAATTTCAC GAACCTACGT GCTGTTTTTC
CGCGGTACGC CGCTGCTGGT GCAGTTGTTC CTGATTTACT ACGGACTGGG GCAATTTCAA
TGGATTCGCG AGAGCATATT GTGGCCGTTC CTGCGGGAAC CCCACTGGTG CGCCCTGTTG
TCGCTCAGCC TGTGTACCGG TGCCTATGCC TGCGAGATTA TCCGTGGCGG ATTGCAGTCC
GTTCCGGTAG GCCAGATCGA ATCCGCGCGC GCCTGCGGCA TGCCGTCGTT CATGATTTTC
AAGCGAATCG TTTTCCCGCT GGCGATCCGT CAGGCGCTCC CTGCTTACGG CAACGAGCTG
ATCTCGATGG TGAAATCGAC CTCGCTGGCT TCCATCATCA CGCTGATGGA AATCACCGGG
ATCGCCGCAC GCCTCATCGC AGAAACTTAC CGTGCGCTCG AAGTCTTCCT GGTCGCCGGT
GCTATTTATC TGTTTATTAA CCTTATTCTG ACACGTTTGC TGATGTGGAC AGAATTTACG
CTTACCCCTC ATCTCCGTGC GCCGGGTGCG CAGCCGGCAG CGAAAAAAAT TAAGAAATTG
GGAGACCTGC AATGA
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| Protein sequence | MDFPFLYDTF LEIIPGIPLT LQLAVSSVFL GFFLALGLAL MQLSSFAVLR SISRTYVLFF
RGTPLLVQLF LIYYGLGQFQ WIRESILWPF LREPHWCALL SLSLCTGAYA CEIIRGGLQS
VPVGQIESAR ACGMPSFMIF KRIVFPLAIR QALPAYGNEL ISMVKSTSLA SIITLMEITG
IAARLIAETY RALEVFLVAG AIYLFINLIL TRLLMWTEFT LTPHLRAPGA QPAAKKIKKL
GDLQ
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