| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_3869 |
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| Symbol | |
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| ID | 8134856 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | + |
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| Start bp | 4353942 |
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| End bp | 4356494 |
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| Gene Length | 2553 bp |
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| Protein Length | 850 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 644867176 |
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| Product | nitrite reductase (NAD(P)H), large subunit |
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| Protein accession | YP_003019420 |
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| Protein GI | 253690230 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1251] NAD(P)H-nitrite reductase |
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| TIGRFAM ID | [TIGR02374] nitrite reductase [NAD(P)H], large subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.104514 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACAAAG TCAGACTCGC TGTTATCGGT AACGGGATGG TTGGCCACCG TTTTATCGAA
GAGTTGCTGG ATAAGGCCCC AACGTCCACC TACGAAATTA CCGTTTTTTG TGAAGAACCC
CGCGTCGCCT ACGATCGTGT CCACCTCTCT TCTTACTTCG CTCACCACAC GGTGGAAGAA
CTCTCTTTAG TACGTGAAGG CTATTACGAA AAGAACGGTG TTAACGTCCT GCTCGGTGAA
CGTGCCATCA CCATCAACCG CAGTGAAAAA GCCATTCACT CCAATTCCGG TCGTACCGTG
TATTACGACA AGCTCATCAT GGCAACCGGC TCCTATCCCT GGATCCCGGC AATCAAAGGG
TCAAACGGGC AAGACTGTTT CGTCTACCGC ACCATTGAAG ATCTGAACGC CATCGAAAAC
TGCGCCCGCC GCAGCAAACG CGGCGCGGTG ATCGGCGGAG GTCTGTTAGG TCTGGAAGCC
GCAGGCGCAC TGAAACACCT TGGCGTAGAA ACGCACGTCA TTGAGTTCGC TCCGGTGCTC
ATGGCCGAAC AGTTGGATGC GCAGGGCGGC GCTCTGCTAC AACGCAAGAT TGAAAACATG
GGTGTGCGCG TACACACCAG CAAGAATACG CAGGCCATCC AGCATTCCGG ACTGGAAAGC
CGCAAGACGA TGGTATTTGC CGACGGCAGC ACGCTGGAAG TCGATTTTAT CGTGTTCTCT
ACCGGCATCC GCGCGCAGGA CAAACTGGCG CGCCAATGTG CGCTGGAAAT CGGCCCACGC
GGTGGTATCA CCATTAACGA TTGGTGCCAG ACTTCCGACC CTGACGTTTA CGCCATCGGC
GAATGTGCCG CCTGGCAGGG CAGACCGTTT GGTCTCGTCG CGCCCGGCTA CAAGATGGCA
CAGGTTGCCG TCGACCATCT GTTAGGGCAT GAAAACCGCT TCCAGGGCGC CGACATGAGC
GCCAAACTGA AGCTGATGGG CGTCGATGTC GGTGGAATTG GCGACGCACA CGGCCATACG
CCGGGCGCTC GCAGCTACAT GTGGCTGGAT GAACAGAAAG AAACCTACAA ACGTCTGATC
GTCAGCGCCG ATAATAAAAC GCTGCTCGGC GCTGTGCTGG TCGGCGACAC GCGGGATTAC
GGCAACCTGC TGCAATTCAT GTTGAACAAG ATCCCGCTAC CGGATTCACC CGAAGCGATG
ATTCTTCCTG CTGCGGCCGG CAGTGCGAAA CCGACGCTGG GTGTAGATGC GCTGCCGGAA
AGCGCCCAAA TCTGCTCCTG CTTCGACGTC TCCAAAGGCG ACATCATCAA AGCGATTAAC
GGCGGCTGTC ATACCGTTGC TGCCATTAAG GAAACCACCA AAGCCGGTAC TGGCTGCGGC
GGCTGCATCC CGCTGTTGAC ACAGGTGTTG AACGCGGAAC TCAGCAAACA GGGGATTGAA
GTCAATAATC ACCTGTGCGA ACACTTCGCC TATTCACGTC AGGAGCTCTA CCACCTGATC
CAAATCGAGA AAATCAAAAC ATTCGATCAG TTGCTGGAGA AACACGGTTC AGGTTACGGC
TGTGAGGTCT GTAAACCGAC CGTGGCGTCC CTGCTGGCTT CCTGCTGGAA TGAATACGTG
CTCAAACCAC AGCACACAGC GCTACAGGAC TCCAACGATA ACTTCCTCGG CAACATCCAG
AAAGACGGCA CGTACTCCGT GATCCCACGC TCCGCAGGCG GAGAAATCAC GCCGGATGGC
CTGATCGCCA TTGGTCGCAT CGCGAAGCAA TATAACCTGT ACACCAAAAT GACCGGCTCC
CAGCGCATGG CGCTATTTGG CGTGCAAAAA GACGACCTGC CGGACGTATG GGCTCAGCTC
ATCGAAGCCG GGTTTGAAAC TGGCCACGCT TATGCCAAGG CGTTACGTAT GGCAAAAACC
TGCGTCGGTA GCACCTGGTG CCGTTTTGGC GTCGGCGACA GCGTGGGCTT TGGCGTCGAG
CTGGAAAACC GCTACAAAGG CATCCGCACG CCGCACAAAA TGAAATTTGG CGTCTCCGGC
TGTACGCGGG AATGTGCAGA AGCACAGGGT AAGGACGTCG GGATTATCGC CACCGAGAAA
GGCTGGAACC TCTATGTGTG CGGCAACGGT GGAATGAAGC CACGCCACGC CGACCTGCTG
GAAGCCGACT TAGATCGCGA CACCTTAATC CGCTATCTGG ACCGCTTCAT GATGTTCTAT
ATCCGCACAG CCGATAAGCT CCAGCGAACC TCCGTCTGGC TGGATAACCT CGAAGGCGGT
ATCGACTATC TGCGCAACGT GATTGTGAAA GACAAACTGG GCATTAACGA TCAGCTTGAA
GCCGATATCG CTCGGCTGCG CGAAGGCTAC GTCTGTGAAT GGCAGGCGAC GCTGGAATCC
CCGGAAGCAC AGAAACGTTT TACCCACTTC ATTAACAGCC CGGAACGTGA CCCGAACGTG
CAAATGGTCA GTGAACGTCA ACAACATCGT CCTGCACGCC CTGCTGAACG TATTCCGGTG
AAACAGATTG AACTAGAAGG GGAAAGCGCA TGA
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| Protein sequence | MNKVRLAVIG NGMVGHRFIE ELLDKAPTST YEITVFCEEP RVAYDRVHLS SYFAHHTVEE
LSLVREGYYE KNGVNVLLGE RAITINRSEK AIHSNSGRTV YYDKLIMATG SYPWIPAIKG
SNGQDCFVYR TIEDLNAIEN CARRSKRGAV IGGGLLGLEA AGALKHLGVE THVIEFAPVL
MAEQLDAQGG ALLQRKIENM GVRVHTSKNT QAIQHSGLES RKTMVFADGS TLEVDFIVFS
TGIRAQDKLA RQCALEIGPR GGITINDWCQ TSDPDVYAIG ECAAWQGRPF GLVAPGYKMA
QVAVDHLLGH ENRFQGADMS AKLKLMGVDV GGIGDAHGHT PGARSYMWLD EQKETYKRLI
VSADNKTLLG AVLVGDTRDY GNLLQFMLNK IPLPDSPEAM ILPAAAGSAK PTLGVDALPE
SAQICSCFDV SKGDIIKAIN GGCHTVAAIK ETTKAGTGCG GCIPLLTQVL NAELSKQGIE
VNNHLCEHFA YSRQELYHLI QIEKIKTFDQ LLEKHGSGYG CEVCKPTVAS LLASCWNEYV
LKPQHTALQD SNDNFLGNIQ KDGTYSVIPR SAGGEITPDG LIAIGRIAKQ YNLYTKMTGS
QRMALFGVQK DDLPDVWAQL IEAGFETGHA YAKALRMAKT CVGSTWCRFG VGDSVGFGVE
LENRYKGIRT PHKMKFGVSG CTRECAEAQG KDVGIIATEK GWNLYVCGNG GMKPRHADLL
EADLDRDTLI RYLDRFMMFY IRTADKLQRT SVWLDNLEGG IDYLRNVIVK DKLGINDQLE
ADIARLREGY VCEWQATLES PEAQKRFTHF INSPERDPNV QMVSERQQHR PARPAERIPV
KQIELEGESA
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