| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_3866 |
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| Symbol | |
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| ID | 8134853 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | - |
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| Start bp | 4349268 |
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| End bp | 4350308 |
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| Gene Length | 1041 bp |
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| Protein Length | 346 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 644867173 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_003019417 |
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| Protein GI | 253690227 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG0601] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTTTTCT CTGATTGGAT CAAGCCGGGT GGAGTACTGC GTCGTTTGGC AAAGCGTCTG
TTTCAGGTGA TCGTCACACT GTTCGGGTTA TTAATCCTGA CTTTCGTGAT CGGCCGCGTG
ATGCCAATCG ATCCGGTCCT GGCTATTGTC GGACAGGATG CCGACCAAAG TACCTATCAA
CAGGTTTACC AGCAGCTGGG GTTGGATAAG CCGCTGTATG TGCAGTTCTT TATTTACTTC
AATTCGCTGA TGCATGGGGA TCTGGGCAAT GCGCTCCTGA CCGGACGGCC GGTTATGGAT
GACATTATCC GCGTTTTCCC GGCCACCGTT GAGCTGGCGA CGATGGCGAT TATCGTCGGT
GCCGGTCTGG GCGTGCCGCT AGGCGTGCTG GCTGCGGCGC GGCGCGGCAA GTGGGCGGAT
TATGTGGTGC GTTTTATCAG TTTGGCTGGT TATTCCACGC CGATATTCTG GGTCGGGATG
ATGGGGCTGC TGGTGTTCTA TGCCTGGCTG AACTGGGTTG GCGGAGCAGG GCGGGTTGAC
ATGGCCTATG ACGGGCTGGT GGAAAACCGT ACCGGTCTGC TGCTGGTGGA TTCGTTACTG
GCGGGCGAGT GGGATGTATT CCGCAGTGCA CTGAACCATT TGGTACTGCC GGCTACGATT
CTCGGTTTCC ACTCGTTGGC CTATATCAGC CGTATGACGC GCAGCTTCAT GCTGGCGCAG
CTTTCGCAGG AATACATCAT TACTGCACGA GTGAAAGGGC TGTCGGAGTT CCGCGTTGTC
TGGGCACACG CGTTTCGCAA TATTCTGGTT CAGCTTCTGA CGGTGGTGGC GCTGGCCTAT
GGCTCGCTGC TGGAAGGGGC GGTACTGATC GAAACGGTCT TCTCATGGCC GGGCTTTGGT
TCCTATCTGA CAGGCAGTCT GCTGCTGGGG GATATGAACG CGGTGATGGG TTGTGTGCTG
CTGGTGGGGT TGATCTTTGT GACGCTTAAC CTGCTGTCGG ACATGTTGTA TCAAATCTTT
GATCCGAGGA CGAACGCATG A
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| Protein sequence | MVFSDWIKPG GVLRRLAKRL FQVIVTLFGL LILTFVIGRV MPIDPVLAIV GQDADQSTYQ
QVYQQLGLDK PLYVQFFIYF NSLMHGDLGN ALLTGRPVMD DIIRVFPATV ELATMAIIVG
AGLGVPLGVL AAARRGKWAD YVVRFISLAG YSTPIFWVGM MGLLVFYAWL NWVGGAGRVD
MAYDGLVENR TGLLLVDSLL AGEWDVFRSA LNHLVLPATI LGFHSLAYIS RMTRSFMLAQ
LSQEYIITAR VKGLSEFRVV WAHAFRNILV QLLTVVALAY GSLLEGAVLI ETVFSWPGFG
SYLTGSLLLG DMNAVMGCVL LVGLIFVTLN LLSDMLYQIF DPRTNA
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