| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_3859 |
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| Symbol | |
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| ID | 8134846 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | + |
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| Start bp | 4341250 |
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| End bp | 4342374 |
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| Gene Length | 1125 bp |
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| Protein Length | 374 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 644867166 |
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| Product | Pectate lyase/Amb allergen |
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| Protein accession | YP_003019410 |
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| Protein GI | 253690220 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3866] Pectate lyase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAATATC TATTGCCTAC GGCAGCCGCC GGATTGTTAC TTTTCGCTGC TCAGCCAGCC
ATGGCCGCCA ATACGGGCGG TTATGCCACT ACGGATGGCG GAGAAGTTTC CGGTGCCGTG
AAAAAGACCG CGCGCTCCAT GCAAGAAATT GTGGATATCA TTGAAGCCGC AAAAGTGGAT
TCAAAAGGCA AAAAAGTCAA AGGCGGTGCG TACCCGCTGA TCATCACCTA TAACGGTAAT
GAAGACTCGC TAATTAAAGC GGCCGAAAAA AATATCTGCG GTCAGTGGAG TAAGGACGCA
CGCGGCGTAC AAGTCAAAGA GTTTACCAAA GGGATCACCA TCCAGGGCAC CAATGGCTCA
TCCGCCAACT TCGGTATCTG GATTATCAAT TCATCTGACG TTGTTGTTCG TAATATGCGC
TTTGGCTATA TGCCGGGCGG CGCGCAAGAC GGCGATGCCA TTCGTATTGA TAACTCGCCG
AACGTCTGGA TTGACCACAA TGAGATCTTT GCCAAAAACT TTGAGTGTAA AGGCACACCA
GACAATGACA CCACTTTTGA ATCGGCCGTC GATATCAAGA AAGGGTCAAC TAACGTCACC
GTGTCATACA ACTACATCCA TGGCATTAAA AAAGTGGGCT TGAGCGGTTC AAGCAATACG
GATACCGGTC GTAACCTGAC TTATCATCAC AATATCTATC GCGATGTTAA CTCACGTCTG
CCGCTACAGC GTGGTGGTCT GGTTCATGCG TACAACAACC TGTATGACGG TATCACCGGT
TCAGGCTTTA ACGTCCGTCA GAAAGGGATC GCGCTGATCG AAAGCAACTG GTTTGAAAAT
GCGTTGAACC CAGTAACGGC ACGTAACGAC AGTTCCAACT TCGGTACCTG GGAGTTGCGT
AATAACAACA TCACCAAACC GGCAGACTTC TCCAAATACA ACATTACCTG GGGCCGCCCT
TCCTCTCCTC ACGTCAATGC GGATGACTGG AAAAGCACCG GCAAGTTCCC TTCCATTTCT
TATAAATACA CCCCAGTTTC TGCACAGTGC GTGAAAGATA AACTGGCAAA CTATGCTGGC
GTAGGTAAAA ACCTGGCAGT CCTGACAGCA GCTAACTGTA AATAA
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| Protein sequence | MKYLLPTAAA GLLLFAAQPA MAANTGGYAT TDGGEVSGAV KKTARSMQEI VDIIEAAKVD
SKGKKVKGGA YPLIITYNGN EDSLIKAAEK NICGQWSKDA RGVQVKEFTK GITIQGTNGS
SANFGIWIIN SSDVVVRNMR FGYMPGGAQD GDAIRIDNSP NVWIDHNEIF AKNFECKGTP
DNDTTFESAV DIKKGSTNVT VSYNYIHGIK KVGLSGSSNT DTGRNLTYHH NIYRDVNSRL
PLQRGGLVHA YNNLYDGITG SGFNVRQKGI ALIESNWFEN ALNPVTARND SSNFGTWELR
NNNITKPADF SKYNITWGRP SSPHVNADDW KSTGKFPSIS YKYTPVSAQC VKDKLANYAG
VGKNLAVLTA ANCK
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