Gene PC1_3856 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_3856 
Symbol 
ID8134843 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand- 
Start bp4337007 
End bp4337606 
Gene Length600 bp 
Protein Length199 aa 
Translation table11 
GC content50% 
IMG OID644867163 
Producttranscriptional regulator, TetR family 
Protein accessionYP_003019407 
Protein GI253690217 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATGACAA AGCGAATACA GCAACGAACA AAAGAGACAC ATGCGCGACT GATCGCGACA 
GCCCAACAAT TGATTGGTGA AGGGGGGTAT GATGCTTTAC GGATTGAGGA GGTCGTAACA 
CGAGCTGGTG TAGCGAAGGG CACTTTTTTT GCCCATTTCA GCGATAAGGA AACGCTGATG 
GACCAACTGA TTGGTGAACG TATTCATCAG TTACTCGATG AAATGGAAGC CGCTGCGATT 
CCTGAAGGAC TTGATGAATT CGTTGAACGA TTGCTGCCTC GTATGCAATT CATGACATCT 
GAACGCTACG TCTTTGACGT TATCTTACGT CGCTCTGGTG CGGCAGGTAT TGAACAGGTT 
GGGCCGATTG CGCTGGCATT CGATCGTTAT ATCGACATTA TCATTCTCTG GCTTGAGGCG 
GGATACTTCC GGCAGGACGT GCCGATGGCT ATCTTAGCTG AGGGCGTTCA GGCATTTGAG 
ACACAGGCGA TGGCGATGAA TTTTTGTGCT GTTCATAGCC AGTTATCACT CCACGAGCGA 
ATACTGCCCT ACCTGCGAGC TTGGCTGTTG GTCCCTGCTT GTGAAAACGC CCCCGGTTAA
 
Protein sequence
MMTKRIQQRT KETHARLIAT AQQLIGEGGY DALRIEEVVT RAGVAKGTFF AHFSDKETLM 
DQLIGERIHQ LLDEMEAAAI PEGLDEFVER LLPRMQFMTS ERYVFDVILR RSGAAGIEQV 
GPIALAFDRY IDIIILWLEA GYFRQDVPMA ILAEGVQAFE TQAMAMNFCA VHSQLSLHER 
ILPYLRAWLL VPACENAPG