Gene PC1_3848 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_3848 
Symbol 
ID8134835 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand- 
Start bp4330435 
End bp4331037 
Gene Length603 bp 
Protein Length200 aa 
Translation table11 
GC content53% 
IMG OID644867155 
ProductLysine exporter protein (LYSE/YGGA) 
Protein accessionYP_003019399 
Protein GI253690209 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1280] Putative threonine efflux protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAACTGA GTTTATTTCT GTCGATGTTA GGGTTTTTGT GGGTGGCGGC CATCACGCCG 
GGGCCGAATA ATATGCTGTT GACCACCTCG GGCGCGAATT TTGGTTTTAT GCGTTCACTG 
TGGCTGATGA TCGGCATCAT GCTGGGCATG CAGAGTATTT TACTGCTGGT GGCATTCGGC 
GTCGGTGGCT TGATTCTGAT TTATCCTTCG CTGCACTTTA TCCTGAAAGT CCTCGGTAGT 
GCCTATCTGC TTTGGCTGGC GTGGAAAATC GCCACGGCGG CTTACGAACG GCTGGAAACG 
TCCGTTGCGC CGCCCAAGCC GATCCGGCTT TATCAGGGGT GGTTACTGCA ATTCCTGAAC 
CCGAAAGCGT GGCTCATGGC GTTGGGCGCG GTGGCCAGTT TTAGTCTGGC GGGTGAAGAG 
TATAACCATT CCGTGATCGC GATAAGCATC GGGATTGTGC TGGTCAATCT GGTGTCCGGT 
GTTATCTGGC TCGGATTTGG CACGATCATT GGGCGACTGC TGCGCAGTAA GAAAGCATGG 
ATTATCTTCA ATGTGTCAAT GGGGCTGCTG ACCGCCGCCT GCGTGCTATT GATTTGGCAT 
TAA
 
Protein sequence
MELSLFLSML GFLWVAAITP GPNNMLLTTS GANFGFMRSL WLMIGIMLGM QSILLLVAFG 
VGGLILIYPS LHFILKVLGS AYLLWLAWKI ATAAYERLET SVAPPKPIRL YQGWLLQFLN 
PKAWLMALGA VASFSLAGEE YNHSVIAISI GIVLVNLVSG VIWLGFGTII GRLLRSKKAW 
IIFNVSMGLL TAACVLLIWH