Gene PC1_3847 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_3847 
Symbol 
ID8134834 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand
Start bp4328463 
End bp4330370 
Gene Length1908 bp 
Protein Length635 aa 
Translation table11 
GC content55% 
IMG OID644867154 
Productputative ABC transporter ATP-binding protein 
Protein accessionYP_003019398 
Protein GI253690208 
COG category[R] General function prediction only 
COG ID[COG0488] ATPase components of ABC transporters with duplicated ATPase domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTGTTT TCTCTTCGCT GCAAATTCGA CGTGGTGTAC GCGTTCTGAT CGACAACGCG 
ACAGCAACAG TTAATCCCGG CCAGAAAGTT GGTCTGGTGG GCAAGAACGG CTGTGGTAAA
TCTACCCTGC TGTCTTTACT GAAAGGTGAA ATCAGCGCCG ATGGCGGCAG CGCGACCTTC
CCGCAAAACT GGTCACTGGC CTGGGTCAAT CAGGAAACGC CTGCGCTGGA CAAGCCCGCG
CTGGACTACG TGATTGACGG CGATCGAGAG TTCCGCCAAC TGGAAGCCGC GTTGCAGACC
GCAAATGAAG AGAATGACGG CAATGCCATT GCCACGCTGC ACGGCAAGCT GGATGCGATT
CAGGCCTGGA CAATTCAGGC CAGAGCCTCA AGCCTGCTCA ACGGACTCGG CTTTTCTCAG
TCACAGTTAC AGCAGCCTGT CAGCGCCTTT TCAGGCGGTT GGCGGATGCG TCTGAATCTG
GCGCAGGCGC TGATCTGTCG CTCCGATCTG CTCCTGCTCG ATGAACCGAC TAACCACCTC
GATCTGGACG CGGTTATCTG GCTGGAAAAG TGGTTGAAAA ACTATGCTGG CACACTGGTA
CTCATTTCGC ATGACCGCGA TTTCCTCGAT CCGGTCGTGA CCAAAATTCT GCACATCGAG
CAGCAGTCGC TCAACGAGTA CACCGGCAAC TATTCTTCGT TTGAACGCCA GCGAGCCACC
CGTCTTGCAC AGCAACAGTC GCTCTATGAA CACCAGCAGG AGCGTGTCGC GCACCTGCAA
CACTATATTG ACCGCTTCCG TGCGAAAGCG ACCAAAGCCA AGCAGGCGCA AAGCCGGATA
AAAATGCTGG AACGCATGGA GCTGATTGCA CCAGCACATG TCGATAACCC TTTCCGCTTC
AGCTTTCGTG CCCCGGAATC GTTGCCCAAT CCATTAATGA AGATGGAAAA GGTCAGCGCA
GGCTATGGCG ACAAGCTGAT TCTGGAATCG ATTAAACTCA ATTTAGTGCC GGGTTCGCGC
ATCGGGCTGC TCGGCCATAA CGGCGCGGGT AAATCCACGC TAATCAAATT GCTTGCTGGC
ACGCTTGCCC CACTGAAAGG GGAAATCGGG CTGGCGAAAG GCGTGAAGCT CGGTTACTTC
GCCCAGCATC AGTTAGAGTT TTTGCGTGCG GACGAGTCGC CTTTGCAGCA TCTGGTGCGT
CTGGCAGAGC GGGAAACGGA ACAACAACTG CGTGACTACC TCGGCGGCTT TGGTTTTCAG
GGCGACAAAG TCACCGAGAT CACCGAGCGC TTCTCTGGCG GCGAAAAAGC CCGTCTGGTA
TTGGCGCTGA TCGTCTGGCA GCGTCCGAAT CTCCTGCTAC TCGACGAACC GACCAACCAC
CTCGATCTGG ATATGCGTCA GGCATTGACC GAAGCGTTAA TTGATTTTGA AGGCGCGCTG
GTTGTTGTTT CACACGATCG ACACCTGATC CGTTCGACTA CCGACGATCT CTATCTGGTA
CACGACCAGA AAGTAGAGCC ATTCGACGGC GATTTGGAAG ACTACCAACA GTGGCTGGTC
GGCCTGCAAC GTCAGGAAAA TGCGGCCGCT GAAACGCCAA AAGAAAATAC CGCCAACAGC
GCGCAGGGCA GAAAAGATCA GAAACGTCGC GAAGCCGAGT TGAGAACGCA AACCCAGCCG
CTACGTAAAC AAATCACCAA GCTTGAACAG CAGATGGAAA AGCTGGGAGA AACGCTGGCA
GCGCTTGAAG CCCGACTGGC GGACAGTGCC ATCTACGACA TCAGCCGCAA GGCCGAGCTC
ACCGACTGCC TGCAACAACA AACCAAAGTC AAAATTGAGC TGGAAGAAAC AGAGCTATCC
TGGCTGGACG CGCAGGAACA GCTAGAGCAG ATGATGCAGA GCGAGTAA
 
Protein sequence
MIVFSSLQIR RGVRVLIDNA TATVNPGQKV GLVGKNGCGK STLLSLLKGE ISADGGSATF 
PQNWSLAWVN QETPALDKPA LDYVIDGDRE FRQLEAALQT ANEENDGNAI ATLHGKLDAI
QAWTIQARAS SLLNGLGFSQ SQLQQPVSAF SGGWRMRLNL AQALICRSDL LLLDEPTNHL
DLDAVIWLEK WLKNYAGTLV LISHDRDFLD PVVTKILHIE QQSLNEYTGN YSSFERQRAT
RLAQQQSLYE HQQERVAHLQ HYIDRFRAKA TKAKQAQSRI KMLERMELIA PAHVDNPFRF
SFRAPESLPN PLMKMEKVSA GYGDKLILES IKLNLVPGSR IGLLGHNGAG KSTLIKLLAG
TLAPLKGEIG LAKGVKLGYF AQHQLEFLRA DESPLQHLVR LAERETEQQL RDYLGGFGFQ
GDKVTEITER FSGGEKARLV LALIVWQRPN LLLLDEPTNH LDLDMRQALT EALIDFEGAL
VVVSHDRHLI RSTTDDLYLV HDQKVEPFDG DLEDYQQWLV GLQRQENAAA ETPKENTANS
AQGRKDQKRR EAELRTQTQP LRKQITKLEQ QMEKLGETLA ALEARLADSA IYDISRKAEL
TDCLQQQTKV KIELEETELS WLDAQEQLEQ MMQSE