Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PC1_3838 |
Symbol | glyA |
ID | 8134825 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
Kingdom | Bacteria |
Replicon accession | NC_012917 |
Strand | - |
Start bp | 4319691 |
End bp | 4320962 |
Gene Length | 1272 bp |
Protein Length | 423 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 644867145 |
Product | serine hydroxymethyltransferase |
Protein accession | YP_003019389 |
Protein GI | 253690199 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0112] Glycine/serine hydroxymethyltransferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTATGACG CTTCTCTTAC CCTTACCGAC TTCGACCCGG AACTGGCCGA CGCCATCCGG CATGAAGAAC AGCGGCAGGA AACTCACATT GAACTTATCG CCTCAGAGAA CTATGCCAGC CCGCTGGTGA TGGCGATCCA GAACTCCGTG TTCACCAACA AATATGCGGA AGGCTACCCA GGCAAGCGCT ACTACAGCGG CTGTGAGCAT GTTGATGTGG CTGAACGCCT GGCGATCGAA CGGGCCAAAG CGCTGTTTGA CTGTGATTAC GCTAACGTCC AGCCCCATGC CGGCGCGCAG GCTAATGCGG CGGTGTTTCT GGCATTGACT AATCCGGGCG ATACCGTGAT GGGCATGAAT CTCGCTCAGG GCGGGCATCT GACCCACGGT AACCCCTCCA ATTTCTCTGG TCGTCACTAC AAGATCGTCC CTTATGGGTT AGATCCTGAC ACAGGGCTGA TCGACTACGA TGAAATGGAG CGTATTGCAT TGGAAGCCCG ACCAAAGATG CTAATAGGCG GGTTTTCCGC CTATTCGCGC CATAAGGATT GGGCACGTAT GCGCGCGATT GCTGACAAGG TGGGCGCTAT CTTCTGGGTG GACATGGCTC ATGTTGCTGG CTTAGTGGCA GCGGGTGAAT ACCCGAATCC GCTCCCTCAT GCGCATGTTG TGACCAGTAC AACCCATAAG ACTCTACGCG GCCCGCGCGG TGGAATTATT TTAGCCAAAG GGCAGAGCGA GGAATTCTAC AAAAAGCTTA ACTCTGCCGT ATTCCCCGGC ATTCAGGGCG GTCCGTTGAT GCACGTTATC GCCGCCAAAG CGGTGGCATT CAAGGAAGCG CTGCGCCCTG AATTCACGGT TTATCAGCGT CAGGTGCTGA CCAACGCCCG TGCCATGGCG CGCGTCCTCC AACTGCGTGG CTACAAGATT GTCTCTGATG GCACCGACAA CCATTTGCTA CTGATTGACC TGTCCGCCAG ACCCTATACT GGGAAGGATG CCGATGCTGC ACTGAGCGAG GCTTACATCA CGACAAACAA GAACTCGGTA CCTAACGATC CGCGTTCACC CTTTGTGACC TCAGGTCTGC GTATTGGAAC GCCAGCCGTG ACGACGCGCG GTTTTGGTGT AGCGGAGTGC GAGCAACTGG CGGGATGGCT ATGTGACGTA CTGGATGGGC TTGGTGAAGG GAATGACGCA TTAATGGCGG TACGCGATCG TGTACGCCAG CAGGTAGTGG CGCTGTGCCG ACGCTATCCT GTGTACCAAT AA
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Protein sequence | MYDASLTLTD FDPELADAIR HEEQRQETHI ELIASENYAS PLVMAIQNSV FTNKYAEGYP GKRYYSGCEH VDVAERLAIE RAKALFDCDY ANVQPHAGAQ ANAAVFLALT NPGDTVMGMN LAQGGHLTHG NPSNFSGRHY KIVPYGLDPD TGLIDYDEME RIALEARPKM LIGGFSAYSR HKDWARMRAI ADKVGAIFWV DMAHVAGLVA AGEYPNPLPH AHVVTSTTHK TLRGPRGGII LAKGQSEEFY KKLNSAVFPG IQGGPLMHVI AAKAVAFKEA LRPEFTVYQR QVLTNARAMA RVLQLRGYKI VSDGTDNHLL LIDLSARPYT GKDADAALSE AYITTNKNSV PNDPRSPFVT SGLRIGTPAV TTRGFGVAEC EQLAGWLCDV LDGLGEGNDA LMAVRDRVRQ QVVALCRRYP VYQ
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