Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PC1_3834 |
Symbol | |
ID | 8134821 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
Kingdom | Bacteria |
Replicon accession | NC_012917 |
Strand | - |
Start bp | 4315179 |
End bp | 4315925 |
Gene Length | 747 bp |
Protein Length | 248 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 644867141 |
Product | YheO domain protein |
Protein accession | YP_003019385 |
Protein GI | 253690195 |
COG category | [S] Function unknown |
COG ID | [COG2964] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.249663 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATGCTGA GGGTGGTGTC TGCCATGTCT AATTCGCTTG TATCTGGCGA ATCTTATGAG CTTGATTTGC TGGATGAACG TCCTTTCAGC CAAACGGACT ATGAGATCCT GAAATCGTAT GAAGCGGTGG TTGATGGCTT GGCCATGTTG ATTGGCGAGC ACTGTGAGAT TGTGTTGCAC TCGCTCGAGG ATCTTAAATG TTCCGCCGTG CGTATTGCGA ATGGAGAACA TACTGGCAGG AAGATTGGCT CGCCGATTAC GGATCTTGCA TTGCGCATGC TGCATGACAT GGCAGGTGAG GATAGCAGCG TATCGAAAGC GTATTTTACC CGCGCAAAAA GCGGTGTGTT GATGAAGTCC GTCACAATTG CGATTCGTAA TCGCGATCAG CGCGTGATTG GGCTGCTATG CATCAACATG AATCTGGACG TCCCTTTCTC CCAGATCGTA CAGACCTTTA TTCCACCTGA AACGCATGAT GCCGCATCTT CTGTTAACTT TGCGTCGTCG GTTGACGACC TCGTGGCACA AACGCTGGAA TTTTCGATCG AAGAAGTCAA TGCGGATCGC AACGTCTCCA ATAATGCGAA AAATCGTCAA ATCGTACTGA GCCTGTACGA GAAAGGTATC TTTGATATTA AAGACGCCAT CAACCAGGTC GCCGAACGTC TCAATATTTC CAAACACACG GTCTACCTTT ATATCCGTCA ATTCAAAAGC GGCGACTTCA GCGGACATGA ACGCTGA
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Protein sequence | MMLRVVSAMS NSLVSGESYE LDLLDERPFS QTDYEILKSY EAVVDGLAML IGEHCEIVLH SLEDLKCSAV RIANGEHTGR KIGSPITDLA LRMLHDMAGE DSSVSKAYFT RAKSGVLMKS VTIAIRNRDQ RVIGLLCINM NLDVPFSQIV QTFIPPETHD AASSVNFASS VDDLVAQTLE FSIEEVNADR NVSNNAKNRQ IVLSLYEKGI FDIKDAINQV AERLNISKHT VYLYIRQFKS GDFSGHER
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