| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_3821 |
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| Symbol | rplD |
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| ID | 8134808 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | - |
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| Start bp | 4306737 |
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| End bp | 4307342 |
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| Gene Length | 606 bp |
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| Protein Length | 201 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 644867128 |
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| Product | 50S ribosomal protein L4 |
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| Protein accession | YP_003019372 |
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| Protein GI | 253690182 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0088] Ribosomal protein L4 |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.0000757079 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGAATTAG TATTGAAAGA CGCGCAAAGC GCGCTGACTG TTTCCGAAAC TACCTTCGGT
CGTGATTTCA ACGAAGCGCT GGTACACCAG GTTGTTGTTG CTTATGCAGC AGGTGCCCGT
CAAGGTACTC GCGCCCAGAA GACCCGTGCT GAAGTAACTG GTTCCGGTAA AAAACCTTGG
CGTCAGAAAG GTACTGGCCG TGCGCGTTCT GGTTCTATTA AGAGCCCGAT CTGGCGTTCC
GGTGGTGTGA CCTTCGCTGC TAAGCCTCAG GACCACAGTC AGAAAGTTAA CAAAAAGATG
TACCGTGGCG CGCTGAAAAG CATTCTGTCC GAGCTGGTAC GTCAAGATCG TCTGATCGTT
GTCGAGAAGT TCTCTGTAGA AGCACCGAAA ACTAAGTTGC TGGCTCAGAA ACTGAAAGAA
ATGGCACTGG AAGACGTGCT GATCATTACC GGTGAACTGG ATGAGAATCT GTTCCTGGCT
GCTCGTAACC TGTACAAGGT TGACGTGCGT GATGCAGCAG CAATCGATCC AGTTAGTTTG
ATCGCCTTCG ACAAAGTCGT TATGACTGCT GACGCAGTTA AGCAAGTTGA GGAGATGCTG
GCATGA
|
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| Protein sequence | MELVLKDAQS ALTVSETTFG RDFNEALVHQ VVVAYAAGAR QGTRAQKTRA EVTGSGKKPW
RQKGTGRARS GSIKSPIWRS GGVTFAAKPQ DHSQKVNKKM YRGALKSILS ELVRQDRLIV
VEKFSVEAPK TKLLAQKLKE MALEDVLIIT GELDENLFLA ARNLYKVDVR DAAAIDPVSL
IAFDKVVMTA DAVKQVEEML A
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