| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_3805 |
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| Symbol | rpsE |
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| ID | 8134792 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | - |
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| Start bp | 4299787 |
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| End bp | 4300287 |
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| Gene Length | 501 bp |
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| Protein Length | 166 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 644867112 |
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| Product | 30S ribosomal protein S5 |
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| Protein accession | YP_003019356 |
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| Protein GI | 253690166 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0098] Ribosomal protein S5 |
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| TIGRFAM ID | [TIGR01021] ribosomal protein S5, bacterial/organelle type |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.000511085 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGCTCACA TCGAGAAACA AGCTGGCGAA CTGCAGGAAA AGCTGATCGC GGTAAATCGC
GTATCTAAAA CCGTTAAAGG TGGTCGTATT TTCAGCTTCA CCGCACTGAC TGTAGTGGGT
GATGGCAACG GCCGCGTAGG TTTTGGTTAC GGTAAAGCTC GCGAAGTTCC AGCAGCGATC
CAGAAAGCGA TGGAAAAAGC CCGTCGCAAT ATGATGAATG TCGCGCTGAA CAACGGCACC
CTGCAGCACC CAGTTAAAGG TGCTCACACG GGTTCTCGTG TGTTCATGCA GCCAGCTTCC
GAAGGTACCG GTATTATCGC CGGTGGTGCA ATGCGCGCCG TTTTGGAAGT TGCAGGGGTT
CACAACGTAT TGGCTAAAGC CTATGGTTCC ACTAACCCGA TTAACGTGGT TCGTGCAACG
ATTGATGGTT TGGCCAACAT GAAGTCCCCG GAAATGGTCG CTGCCAAGCG TGGTAAATCC
GTTGAAGAAA TTCTGGGGTA A
|
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| Protein sequence | MAHIEKQAGE LQEKLIAVNR VSKTVKGGRI FSFTALTVVG DGNGRVGFGY GKAREVPAAI
QKAMEKARRN MMNVALNNGT LQHPVKGAHT GSRVFMQPAS EGTGIIAGGA MRAVLEVAGV
HNVLAKAYGS TNPINVVRAT IDGLANMKSP EMVAAKRGKS VEEILG
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