Gene PC1_3803 details

Gene Information

• Locus tag: PC1_3803
• Symbol: rplO
• ID: 8134790
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pectobacterium carotovorum subsp. carotovorum PC1
• Kingdom: Bacteria
• Replicon accession: NC_012917
• Strand: -
• Start bp: 4299164
• End bp: 4299598
• Gene Length: 435 bp
• Protein Length: 144 aa
• Translation table: 11
• GC content: 49%
• IMG OID: 644867110
• Product: 50S ribosomal protein L15
• Protein accession: YP_003019354
• Protein GI: 253690164
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0200] Ribosomal protein L15
• TIGRFAM ID: [TIGR01071] ribosomal protein L15, bacterial/organelle

Plasmid Coverage information

• Num covering plasmid clones: 1
• Plasmid unclonability p-value: 0.000421274
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCGTTTAA ATACTCTGTC TCCGGCCGAA GGTGCTAAAC ACGCACCGAA GCGTTTAGGT 
CGTGGTATCG GTTCTGGCCT GGGCAAAACT GGCGGTCGTG GTCACAAAGG TCAGAAATCT 
CGTTCTGGCG GTGGCGTACG TCGTGGTTTT GAAGGTGGTC AGATGCCTTT ATACCGTCGT 
CTGCCGAAAT TCGGTTTTAC TTCTCGTAAA GCGATGATCA CGTCAGAAGT TCGTCTGTCT 
GATCTTGCTA AAGTAGAAGG CGACGTAGTT GACCTGAATA CGCTGAAAGC CGCTAATGTT 
ATTGGCATTC AGATTGAATT CGCGAAAGTG ATTCTGTCTG GTGAAGTTGC TCGTCCGGTA 
ACGATTCGTG GTCTGCGTGT CACTAAAGGT GCTCGTGCTG CTATCGAAGC TGCTGGCGGT 
AAAATTGAGG AATAA 

 

Protein sequence

MRLNTLSPAE GAKHAPKRLG RGIGSGLGKT GGRGHKGQKS RSGGGVRRGF EGGQMPLYRR 
LPKFGFTSRK AMITSEVRLS DLAKVEGDVV DLNTLKAANV IGIQIEFAKV ILSGEVARPV 
TIRGLRVTKG ARAAIEAAGG KIEE