| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_3780 |
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| Symbol | |
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| ID | 8134763 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | - |
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| Start bp | 4277472 |
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| End bp | 4278401 |
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| Gene Length | 930 bp |
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| Protein Length | 309 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 644867083 |
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| Product | homoserine O-succinyltransferase |
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| Protein accession | YP_003019331 |
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| Protein GI | 253690141 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1897] Homoserine trans-succinylase |
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| TIGRFAM ID | [TIGR01001] homoserine O-succinyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCCAATTC GGGTTCCTGA TGAGTTACCA GCCGTCAATT TTCTGCGTAA TGAGAACGTC
TTTGTCATGA CGTCCTCGCG TGCTAAAACG CAGGAAATTC GTCCCCTCAA AGTGCTGGTG
CTGAACCTGA TGCCTAAAAA GATCGAGACT GAAAACCAGT TTCTGCGCCT GTTATCCAAC
TCTCCCCTAC AGATTGATAT CCAGCTGTTG CGTATTGATA GCCGTGAATC AAAGAATACG
CCGGCCGAGC ATTTGAATAA CTTCTACTGC GATTTCGACG ATATTCAGAA CGACAATTTT
GATGGCCTGA TTGTGACGGG CGCACCGTTG GGATTAGTCG ATTTCTGCGA TGTTGTTTAT
TGGCCACAGA TCGCGCGTGT CATCGAGTGG GCAAAAGAGC ATGTTACCTC CACATTATTT
GTGTGTTGGG CTGTGCAGGC TGCTCTCAAT ATCCTCTACG GTATTCCTAA GATGACCCGC
AAGGAAAAGC TCTCTGGCGT TTATTCGCAT CAGACGTTAC AACCCCATGC GTTGCTGACC
CGCGGTTTTG ATGAAACGTT TCTGGCTCCA CATTCGCGCT ATGCGGATTT CCCGGTTGAT
GTGATTCGGC AGTATACAGA TTTGGATATT CTGGTTGAGT CGGAGCAGGC TGGCGCCTAT
TTGTTTGCCA GCAAAGATAA GCGTCTGGCG TTTGTTACCG GACACCCAGA GTACGACGCC
CTAACGTTGG CTGGAGAGTT TTTCCGTGAT TATGATGCCG GATTGGATCC AGCGGTTCCG
GTTAACTATT TCCCTGACGA CAATCCTGAA CTGGCACCGA AAGCGAGCTG GCGTAGTCAC
GGTCATCTGC TTTTTGTTAA CTGGCTGAAT TATTACGTCT ACCAGATTAC GCCTTATGAT
TTACGTCGAA TGAACCCTAC GCTGGACTAA
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| Protein sequence | MPIRVPDELP AVNFLRNENV FVMTSSRAKT QEIRPLKVLV LNLMPKKIET ENQFLRLLSN
SPLQIDIQLL RIDSRESKNT PAEHLNNFYC DFDDIQNDNF DGLIVTGAPL GLVDFCDVVY
WPQIARVIEW AKEHVTSTLF VCWAVQAALN ILYGIPKMTR KEKLSGVYSH QTLQPHALLT
RGFDETFLAP HSRYADFPVD VIRQYTDLDI LVESEQAGAY LFASKDKRLA FVTGHPEYDA
LTLAGEFFRD YDAGLDPAVP VNYFPDDNPE LAPKASWRSH GHLLFVNWLN YYVYQITPYD
LRRMNPTLD
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