| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_3779 |
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| Symbol | |
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| ID | 8134762 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | - |
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| Start bp | 4275590 |
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| End bp | 4277188 |
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| Gene Length | 1599 bp |
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| Protein Length | 532 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 644867082 |
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| Product | malate synthase |
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| Protein accession | YP_003019330 |
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| Protein GI | 253690140 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG2225] Malate synthase |
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| TIGRFAM ID | [TIGR01344] malate synthase A |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATGCAGC AGACGATAAA CAGAGAATTG GCGTTTAGTC AGCGCTTTGG CGAAGGTGAG
AAGCAAATTC TTACGGAGGA AGCGATTGAT TTCTTAACGG AGCTGGTCGC GCATTTCACG
CCGGCACGTA ATCAGTTGCT CGCCGAACGG CAGATCCAGC AGCGTAATAT CGATCAGGGT
AAGCTGCCTG ATTTTATTTC AGAAACGGCT TCCATTCGTG ATGGAGCATG GACAATACGC
GGTATTCCCG ATGACCTTCA GGATCGTCGC GTTGAGATTA CCGGCCCGGT TGAACGCAAG
ATGGTAATCA ATGCGTTGAA TGCCAATGTG AAAGTTTTCA TGGCGGACTT TGAAGATTCG
CTGTCGCCGG GATGGGAAAA GGTCATCGAC GGGCAAATCA ACTTGCGGGA TGCCGTACGC
GGTACGATTT CCTATATCAA TGAAGCAGGA AAAATTTACC AGTTGAAGCC CAATCCTGCT
GTATTGATTT GCCGCGTGCG TGGGTTGCAT TTGCCTGAAA AACACGTGTC CTGGCAGGGG
GAGGCCATTC CTGGCAGCCT GTTTGATTTC GCACTGTATT TTTTCCACAA CTATCAGGAG
TTGCTGAAGA AAGGTAGCGG CCCTTACTTC TATCTGCCCA AGACGCAGTC ATGGCAGGAA
GCGGCCTGGT GGAATGATGT CTTCTGTTAT ACGGAAGATC GTTTTGACCT GCAGCGTGGG
ACGATCAAAG CGACGGTGTT GATTGAAACG CTGCCTGCCG TTTTCCAGAT GGACGAAATC
CTCTATCACT TGCGCGATCA TATCGTTGGG CTGAACTGCG GGCGCTGGGA TTACATCTTC
AGCTATATCA AAACATTAAA GAACCACGGC GATCGCGTGC TGCCTGACCG CCAGTCGGTA
ACGATGGAAA AACCCTTCCT TAGCGCTTAC TCACGGCTGT TGATCAAGAC CTGTCATCGC
CGTGGCGCGT TCGCCATGGG TGGGATGGCA GCGTTCATTC CGAGCAAGGA TGCGGAACGC
AATAACTGGG TATTGGATAA GGTACGTAAA GACAAAGAGT TGGAAGCTCA CAATGGGCAT
GATGGCACCT GGGTGGCCCA TCCGGGGCTG GCTGATGCCG TGATGGAGGT GTTCGATCGA
GCGTTAGGTG AGCGTAAAAA TCAGCTCAAT ATCGGCCGTG AGCAGGATGC CCCCATTCGT
GCCGAGGAAT TGCTTGAGCC TTGTCCGGGA GAGCGCACGG AAGTGGGGAT GCGTGCGAAT
ATTCGCGTTG CGGTGCAGTA CATCGAGGCA TGGATATCTG GTAATGGCTG CGTCCCGATT
TATGGGCTGA TGGAGGATGC GGCGACGGCA GAAATCTCCC GCACCTCAAT CTGGCAGTGG
ATTCGCCACG GCAAAACATT GAGCGATGGT CGAGTGATCA CCAAGGCGCT GTTCCGACAG
ATGTTGGCCG AAGAGATGTT TGTGATTCAG GAGGAGCTCG GCGATGCCCG TTTCAGCGGA
GGGCGCTTTG ATGACGCCGC CCGGCTGATG GAGCAAATCA CCACGCAAGA TGAGCTGATC
GACTTCCTGA CGTTACCCGG CTACGCATTG CTTGATTAA
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| Protein sequence | MMQQTINREL AFSQRFGEGE KQILTEEAID FLTELVAHFT PARNQLLAER QIQQRNIDQG
KLPDFISETA SIRDGAWTIR GIPDDLQDRR VEITGPVERK MVINALNANV KVFMADFEDS
LSPGWEKVID GQINLRDAVR GTISYINEAG KIYQLKPNPA VLICRVRGLH LPEKHVSWQG
EAIPGSLFDF ALYFFHNYQE LLKKGSGPYF YLPKTQSWQE AAWWNDVFCY TEDRFDLQRG
TIKATVLIET LPAVFQMDEI LYHLRDHIVG LNCGRWDYIF SYIKTLKNHG DRVLPDRQSV
TMEKPFLSAY SRLLIKTCHR RGAFAMGGMA AFIPSKDAER NNWVLDKVRK DKELEAHNGH
DGTWVAHPGL ADAVMEVFDR ALGERKNQLN IGREQDAPIR AEELLEPCPG ERTEVGMRAN
IRVAVQYIEA WISGNGCVPI YGLMEDAATA EISRTSIWQW IRHGKTLSDG RVITKALFRQ
MLAEEMFVIQ EELGDARFSG GRFDDAARLM EQITTQDELI DFLTLPGYAL LD
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