| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_3773 |
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| Symbol | |
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| ID | 8134756 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | - |
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| Start bp | 4263551 |
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| End bp | 4265656 |
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| Gene Length | 2106 bp |
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| Protein Length | 701 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 644867076 |
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| Product | TonB-dependent siderophore receptor |
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| Protein accession | YP_003019324 |
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| Protein GI | 253690134 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4773] Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid |
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| TIGRFAM ID | [TIGR01783] TonB-dependent siderophore receptor |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTCAGAA AAACGCGGCT GGCGCTGGTG GTTGGCTGCC TTACCAGTGG ATTTACGGTG
TCGGCACTGG CGCAGGATAC GCCATCCTCT TCTTCTCAGG GTGATACGGT CGTCGTCACG
TCTCAAACGC AACGCGGTGC GACCAAGCTG GAAACGCCCG ATATCGAGAC TCCTCAGGCC
GTTTCTATCA TTACGCGCGA TCAGATTCAG GAACAGGGTG CGATTAGCGT TCGGCAAGCA
GTTGGTTATA CGCCGGGTGT GTACAACAAC CAGATCGGTG GGTCCAACCG CTTTGACTAC
ATGGTGCTGC GCGGCTTTTC CGATGGCAGT CTTGATAACG TCTATCTCGA CGGGCTGAAG
ATGATGGGGG ATACCAACTC TCATAGCTCG CTGGTTATCG ATCCCTGGTT CCTCGATAGC
ATTGAAGTCG TCAGAGGCCC GGCGTCTGTG CTCTACGGGC GCTCTTCTCC GGGTGGGATT
GTGGCGCTGA ACTCCCGTCA GCCGTCGTTC GATCGCAGCG GGCAGATCAA ACTGTTTGCT
GGCAATAATG CGCAGCGTGG CGCTGCGTTC GATGTCACCG GCCCGCTGGA TGACGATGAG
CGTTTTGCGT TCCGTCTGGG CGGCATTGTG CGTGAAGCCG ATACGCAGTT CAAAAAGACC
AAAGAAGAAC GCTACGCGAT TGCGCCCAGC CTGCTGTGGC GGATTTCCGA CAAGACGCGG
CTGGAGTTGA TGGCTTACCT GCACCGCGAT CCTGAAGGCG GTAGCCACTC GGGGTTGCCG
TATGACGGTA CTGTGGTGGC GCATAACGGG CGGAAAATCT CGAACACCTT CTATGAAGGG
GAAGAGAATT ATGAGAAATA CGACCGTAAG CAAAACATGG TGGGGTACAA CTTTGAGCAT
GGTTTCGATA ACGGCTGGGC GGTGCGCCAA AAGCTGCGTT ATCTGCGTAC CAAAGTGCAT
TTGGATCAGG TGTACGCCTA CGGCTGGACG CAGCCGAGCG CCGATACGCT GACTCGTTAT
TACTCGGGTT CCCGTGAGTC GCTGTCCGCA TTAACGTTAG ATAATCAGCT TGATGGAAGC
GTGGATACGG GAGCCGTGAA CCATCGTCTG CTGGTGGGGA TCGACTATCA GCAGCGTAAT
AATAATATGG ACTGGCCTTC TGGCACCTTC CCGGCGATTG ACGCGTTTAA TCCCGTTTAT
GGTTCCGGAC CAACAAGTAT GTCCAGCTCG CAGGAAAGAC ACAAACTGCA ACAGACGGGG
ATCTACGTAC AGGATCAAAT GAGCTGGGAG CGCTGGCGCT TAACGCTGGG TGGTCGCCAC
GATCAAGTAA AAGTGACCCA CGTTAACCAC ACCAAAGGAA CACACAGCGA GTTGGATAAA
AACAACTTTA GCTCACGTGC TGCCTTGCTC TATCTGTTTG ATAACGGCTT TGCGCCATAT
GTCAGCTATT CCACGGCCTT TACGCCAACC AGCTTCGCCG ATGATAACGG CAACGTACTG
GAACCAATGA AAGGCAAACA GTGGGAAGCC GGGATGAAGT ATCAGCCTGA AGGTTCTCAG
GATCAGTACA GTCTGTCGGT ATTCCGCATT AATCAGAAGA ACGTGGCGAC AAAAGTTCAG
CCTAACGACC CTTACCGTTC CATTGGTGAA ATCGAATCGG AAGGGGTGGA GTTGGAGGCC
GTGAGCCATC TTACTGATAA TCTGCGTCTG CAAGCGGCTT ATACCTATAC GGATATTCGC
TATAAGAAAA GTAGTGTGGC TGAGCAAGGA AAGCGTGCGG TGTACGCACC GCGCAATCAG
GCCAGCGTCT GGGCGAACTA TGATGTCAAA AGTGGTCCGC TGGACGGTCT GACGATTGGT
TCCGGTGTGC GTTATGTGAA CGGCGTGACC TCCGATCGTG CCAATACCCA TACGCTGCCT
TCTTATACGC TGGTGGATAT GGCGATAGGA TACGATCTCT CGAAGGTGGG TCTGAAAGGG
CTAAGCGCGC AGCTTAATGT CAACAACCTG ACCGATAAAC GTTATGTTGC TTCCTGTAAC
TCGCTGGAAT TCTGTTACTT CGGTGCCGAG CGCAGCGTAG TCGGCAGCGT CTCTTATTCG
TTCTAA
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| Protein sequence | MFRKTRLALV VGCLTSGFTV SALAQDTPSS SSQGDTVVVT SQTQRGATKL ETPDIETPQA
VSIITRDQIQ EQGAISVRQA VGYTPGVYNN QIGGSNRFDY MVLRGFSDGS LDNVYLDGLK
MMGDTNSHSS LVIDPWFLDS IEVVRGPASV LYGRSSPGGI VALNSRQPSF DRSGQIKLFA
GNNAQRGAAF DVTGPLDDDE RFAFRLGGIV READTQFKKT KEERYAIAPS LLWRISDKTR
LELMAYLHRD PEGGSHSGLP YDGTVVAHNG RKISNTFYEG EENYEKYDRK QNMVGYNFEH
GFDNGWAVRQ KLRYLRTKVH LDQVYAYGWT QPSADTLTRY YSGSRESLSA LTLDNQLDGS
VDTGAVNHRL LVGIDYQQRN NNMDWPSGTF PAIDAFNPVY GSGPTSMSSS QERHKLQQTG
IYVQDQMSWE RWRLTLGGRH DQVKVTHVNH TKGTHSELDK NNFSSRAALL YLFDNGFAPY
VSYSTAFTPT SFADDNGNVL EPMKGKQWEA GMKYQPEGSQ DQYSLSVFRI NQKNVATKVQ
PNDPYRSIGE IESEGVELEA VSHLTDNLRL QAAYTYTDIR YKKSSVAEQG KRAVYAPRNQ
ASVWANYDVK SGPLDGLTIG SGVRYVNGVT SDRANTHTLP SYTLVDMAIG YDLSKVGLKG
LSAQLNVNNL TDKRYVASCN SLEFCYFGAE RSVVGSVSYS F
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