| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_3772 |
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| Symbol | |
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| ID | 8134755 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | - |
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| Start bp | 4262201 |
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| End bp | 4263046 |
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| Gene Length | 846 bp |
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| Protein Length | 281 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 644867075 |
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| Product | intradiol ring-cleavage dioxygenase |
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| Protein accession | YP_003019323 |
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| Protein GI | 253690133 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3485] Protocatechuate 3,4-dioxygenase beta subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAATTGA ATAATAAAAA TAGACGGTTT TTCTTTATTA GCTCTGCGAA ACGAATCATT
GGAACCGTCG GGTTATTATC GTTAGCGAAT ATACCGTTCT ATACGAGGGC GAATGACGTA
GCGGATAAGG CAAAGAACGT TGGGATAAAG ACGTGCCCAC TCACGACGGA ACAAATTGTA
GGGCCTTATT TTGTGGATTA TAAAATACTA CGGCGTGATA TTACCGAGTC TCAACCTGGC
ATCCCGTTGC TGTTGAAGAT AAAAGTGATC GATGGGGTGT CTTGTGAACC CGTGGATAAC
ATATTGGTTG ATATCTGGCA CTGTAACGCC CGAGGAAAAT ACTCAGGTTG GAGCTTCATT
AGCCCTGATA AAGAAGCGAC AACAGATGAG GTCGGGACCG TTAACAGAAC AGATAGCACC
AGCTTCTTTC GGGGTATACA GCCAACAGAC CAGAATGGTG TAGTGAGGTT CACGACGATA
TTCCCCGGGT TCTATGCTGG CAGGGCGACA CATATTCATG TTGCGATAAG GCGGCCAAGT
AAAAATCCTC TGGAAAAAGA GCACTTTGCT TTTGTCGGGC AGTTATATTT CCCAGAGGAT
CTTTGTCGTG TGGTTTATAA TAACGAACCC TATAGTCCAA GGGATATCAC GCGAGTGACC
AACACTGAAG ATGAATATTT TACCAAGATG AATGGCGCGC AATCGCTACT TACGGTAAAT
AAAATCAACG AAGGTGATTT CAATGATGGG TTCACGGGGG AAATCATTTT GTCTATTGAT
AAGAATGCGA CCTCTACCTA CCTCACTCAG CGTGATTTAT ACAAGTATAC GGTTTCACAA
GAGTAG
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| Protein sequence | MELNNKNRRF FFISSAKRII GTVGLLSLAN IPFYTRANDV ADKAKNVGIK TCPLTTEQIV
GPYFVDYKIL RRDITESQPG IPLLLKIKVI DGVSCEPVDN ILVDIWHCNA RGKYSGWSFI
SPDKEATTDE VGTVNRTDST SFFRGIQPTD QNGVVRFTTI FPGFYAGRAT HIHVAIRRPS
KNPLEKEHFA FVGQLYFPED LCRVVYNNEP YSPRDITRVT NTEDEYFTKM NGAQSLLTVN
KINEGDFNDG FTGEIILSID KNATSTYLTQ RDLYKYTVSQ E
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