Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PC1_3768 |
Symbol | pgi |
ID | 8134751 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
Kingdom | Bacteria |
Replicon accession | NC_012917 |
Strand | - |
Start bp | 4255148 |
End bp | 4256797 |
Gene Length | 1650 bp |
Protein Length | 549 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 644867071 |
Product | glucose-6-phosphate isomerase |
Protein accession | YP_003019319 |
Protein GI | 253690129 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0166] Glucose-6-phosphate isomerase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.510592 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAATA TCAATCCAAG CCAAACTGCC GCCTGGCAGG CATTACAACA CCATTTTGAC GCGATGAAAG AGGTGCAAAT CAGCGAGCTG TTTGCACAGG ATAGCGATCG TTTCGCGCAT TTTTCCGCGA CGTTCGACGA TCTGATGCTG GTGGATTACT CCAAAAACCG CATCACGACC GAAACGATGG AAAAACTGCA CGCGCTGGCG CGGGAAACCG ACCTGTCTGC GGCGATTCAG TCCATGTTTG CCGGCGAGAA AATCAACCGC ACGGAAGACC GCGCCGTTCT GCACGTTGCC CTACGTAACC GCAGCAACAC GCCGATTCTG GTAGATGGCA AAGATGTGAT GCCGGAAGTC AACGCGGTGC TGGCGAAGAT GAAAGATTTC AGCGAGCGCG TGATCGGCGG TGAGTGGAAA GGTTATACCG GAAAAACGAT CACCGACGTG GTGAACATCG GTATCGGCGG CTCTGATCTG GGTCCGTTCA TGGTAACGGA AGCGCTGAAG CCTTATAAAA ATCACCTCAA CATGCACTTT GTCTCCAACG TTGACGGCAC GCATATTGCT GAAACGTTGA AGCCGCTAAA CCCGGAAACC ACGCTGTTCC TCGTTGCGTC AAAAACCTTC ACCACGCAGG AAACCATGAC CAACGCGCAT AGCGCACGCG ACTGGTTCCT GAACACGGCG AAGGACGAGA AGCACGTTGC CAAGCACTTT GCCGCGCTGT CTACCAACGC GAAAGCCGTC GGCGAATTTG GTATCGATAC CAACAACATG TTTGAGTTCT GGGACTGGGT GGGCGGACGC TACTCCCTGT GGTCGGCAAT TGGGCTGTCG ATCATTCTTT CTCTGGGCTT TGAGAACTTT GAAAAACTGC TCAGCGGCGC GCATGCGATG GACAAGCACT TTGCTTCCAC GCCCGCAGAG AAAAACCTGC CTGTGCTGCT GGCGCTGATC GGCATTTGGT ACAACAATTT CTTCGGTGCC GAAACCGAAG CGATTCTGCC GTATGACCAG TACATGCACC GCTTCGCCGC CTATTTCCAA CAGGGAAATA TGGAATCCAA CGGCAAATCT GCCGATCGCA ATGGCAATCC GGTGGATTAC CAGACCGGGC CGATTATTTG GGGTGAGCCG GGCACGAACG GCCAGCATGC CTTCTACCAG TTGATTCATC AGGGCACCAA GCTGATACCG TGTGATTTCA TTGCACCGGC TGTTAGCCAT AACCCATTGA GCGATCACCA CAGCAAGCTG CTGTCGAACT TCTTTGCACA GACGGAAGCG CTGGCGTTTG GTAAGAGCCG TGACGTAGTA GAAGCGGAAT TTGCAGCGGC CGGCAAAAGT GCCAAAGATG TGGAACACGT GGCGCCGTTT AAAGTCTTTG AAGGCAACCG CCCAACCAAC TCCATCCTGC TGCGCGAAAT CACCCCGTAC AGCCTGGGTG CGCTGATTGC GCTGTATGAA CACAAGATCT TTACTCAGGG TGCGATCCTG AACATCTTCA CGTTCGATCA GTGGGGCGTA GAGTTAGGTA AACAACTGGC GAACCGTATC CTGCCAGAGC TGGAAAATGA CAGTACGATC GACAGCCATG ACAGTTCCAC TAACGGGCTG ATCAACCGTT TCAAAGCGTG GCGTAACTAA
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Protein sequence | MKNINPSQTA AWQALQHHFD AMKEVQISEL FAQDSDRFAH FSATFDDLML VDYSKNRITT ETMEKLHALA RETDLSAAIQ SMFAGEKINR TEDRAVLHVA LRNRSNTPIL VDGKDVMPEV NAVLAKMKDF SERVIGGEWK GYTGKTITDV VNIGIGGSDL GPFMVTEALK PYKNHLNMHF VSNVDGTHIA ETLKPLNPET TLFLVASKTF TTQETMTNAH SARDWFLNTA KDEKHVAKHF AALSTNAKAV GEFGIDTNNM FEFWDWVGGR YSLWSAIGLS IILSLGFENF EKLLSGAHAM DKHFASTPAE KNLPVLLALI GIWYNNFFGA ETEAILPYDQ YMHRFAAYFQ QGNMESNGKS ADRNGNPVDY QTGPIIWGEP GTNGQHAFYQ LIHQGTKLIP CDFIAPAVSH NPLSDHHSKL LSNFFAQTEA LAFGKSRDVV EAEFAAAGKS AKDVEHVAPF KVFEGNRPTN SILLREITPY SLGALIALYE HKIFTQGAIL NIFTFDQWGV ELGKQLANRI LPELENDSTI DSHDSSTNGL INRFKAWRN
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