Gene PC1_3766 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_3766 
Symbol 
ID8134749 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand+ 
Start bp4253652 
End bp4254707 
Gene Length1056 bp 
Protein Length351 aa 
Translation table11 
GC content54% 
IMG OID644867069 
Productlysine 2,3-aminomutase YodO family protein 
Protein accessionYP_003019317 
Protein GI253690127 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1509] Lysine 2,3-aminomutase 
TIGRFAM ID[TIGR00238] KamA family protein 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCACACA TTGTAACCCT AAATATACCT TCCAGAGAAG ATTGGTTGCA GCAACTTGCA 
GACGTAATTA CCGATCCTGA TGAATTACTG CAACTTTTGG CACTGAACGA TCACGCAAAA 
CTTCGGCAAG GCAATGATGC ACGCAGACTT TTTGCTCTGC GAGTACCGCG CGCCTTCGCT 
GCACGGATGC AAAAAGGCAA TCCTGACGAT CCGTTGCTGC TACAGGTATT GACCGCGCGT 
GAGGAGTTTA CTGCCACGCC AGGCTTCACC CACGATCCGC TTGATGAGCA ACACAGTGTC 
GTGCCGGGGC TACTGCACAA ATATCACAAC CGCGCGTTAC TGCTGGTTAA AGGCGGCTGC 
GCGGTGAACT GCCGCTACTG CTTCCGCCGC CATTTCCCCT ATCAGGATAA TCAAGGCAAT 
AAGGCTAACT GGCGTCAGGC GCTGGATTAT ATCCGCCAGC ATCCCGAACT GGATGAAATC 
ATTTTTTCCG GCGGCGACCC GCTGATGGCC AAGGATCACG AGCTGGACTG GCTGATCACC 
GAGCTGGAAC ATATTCCACA TCTGAAACGT CTGCGTATTC ACAGCCGCTT GCCGGTGGTG 
ATCCCTGCCC GCATTACCGA CGCGCTATGC GATCGTCTGT CCCGCAGTTC GCTTCAGGTG 
TTGCTGGTGA CGCATATTAA CCACCCGCAG GAAATTGATA CTGATTTAAC ACAAGCTATG 
GCGCGTTTGC GCCGTGCAGG CGTGACGCTG CTCAACCAAA GCGTGCTGCT GCGCGGGGTG 
AATGACAGCG CGGACACGCT CGCCCAGCTC AGCAATGCAC TATTTGACGC AGGCATTCTG 
CCTTATTACC TGCACGTACT GGATAAGGTA CAAGGTGCCG CGCATTTTCT GGTGGATGAC 
AATGAGGCGC GCATCTTGGT CAAAGCGCTG CTGAAGAAGG TATCCGGCTA TCTGGTGCCA 
CGTCTGGCGC GAGAAATTGG TGGTGAAGCC AGTAAAACAC CGCTGGATTT AGGGATGAAG 
CAGCATCAGG ACGACACTGA GCGATCGGTG GAGTAA
 
Protein sequence
MAHIVTLNIP SREDWLQQLA DVITDPDELL QLLALNDHAK LRQGNDARRL FALRVPRAFA 
ARMQKGNPDD PLLLQVLTAR EEFTATPGFT HDPLDEQHSV VPGLLHKYHN RALLLVKGGC 
AVNCRYCFRR HFPYQDNQGN KANWRQALDY IRQHPELDEI IFSGGDPLMA KDHELDWLIT 
ELEHIPHLKR LRIHSRLPVV IPARITDALC DRLSRSSLQV LLVTHINHPQ EIDTDLTQAM 
ARLRRAGVTL LNQSVLLRGV NDSADTLAQL SNALFDAGIL PYYLHVLDKV QGAAHFLVDD 
NEARILVKAL LKKVSGYLVP RLAREIGGEA SKTPLDLGMK QHQDDTERSV E