| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_3756 |
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| Symbol | |
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| ID | 8134739 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | + |
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| Start bp | 4243405 |
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| End bp | 4246728 |
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| Gene Length | 3324 bp |
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| Protein Length | 1107 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 644867059 |
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| Product | hypothetical protein |
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| Protein accession | YP_003019307 |
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| Protein GI | 253690117 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3264] Small-conductance mechanosensitive channel |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCGTCTGA TTCTGACTTT TCTTCTGGGA TGTTTATTAT CAACTGCCAC GTTGGCTGCC
ACTGCGCCCA ATGAGGCGCA GTTACGCCAG CAGCTACAGC AGGCGGAGGC GAACAAAGGT
GCAGCCGATC AAGCAAAGAT CGTTGAAGAA TATCAGGCTG CACTGAACAC CCTACAGGAT
CGCAAAGAGT CACTGGAGCG CGCCACACAG TATCAACGCG TGATTGATGA CTTCCCCAAA
CTGGTTCAGG AGCTGCGACG CCAGCTTAAC GCCGAAGACG GCAAGCCCTC GTCCATTTCA
GAAAGTCTCT CCAGTAACGA TCTCGAACAA CAGTTGCTGC AAACGAGCAG CCAATTGCTG
GAACAGGCGC GCCAACTCCA GCAGGAACAA GATCGGCTGC GTGAGATCGG CGATTCACTG
AGCCAGCTTC CGCAGCAGCA AACGGAAGCC AGCCGCATGC AAAGCGAGGC CGAGCGACGT
ATTCAGTCTC TCGGTACGCC CGCCACGCCG CTGGGGCAAG CACAGCTCGT CGCGCTTCAG
GCCGAATCCG CACTGCGTAA AAGCCGGGTG GACGAACTGG AACTGGCGCA GCTTTCCGCC
AGCAATCGTC AGGAGCTGTC CCGGCTACGC GTCGAACTGT ATAAGAAGCG TCACGACAGG
CTGGATCTGC TGCAACAGGA TTTACGCAGC CGGCTCAATA ACCTGCGCCA GCGCGAGGCT
GAGCAGGCAT TAGAACGCAC AGAACTTCTC GCTGAACAAA GTGGCGACTT ACCCAGCGTC
ATCAGCAAGC AGCTACAGGT TAACCGCGAG CTCTCCGTCG CGCTGAACCA ACAGGCGCAG
CGGATGGACC TTATCGCCTC TCAACAGCGT CAGGCTGCCA CGCACACCAT TCAGGTTCGT
CAGGCGCTGA GCACTATCCG CGAACAGGCA CAGTGGCTCG GCGTCTCACC GATATTGGGA
GAAACGCTAC GGGCGCAGAT AGCGCGCCTG CCGGAAATGC CCAAGCCTCA GCTGCTGGAT
AGCGACATGG CGCAGCTGCG CGTACAGCGG CTGCACTTTG AAGACCTGAT CAACAAGCCG
CAGGATCTTG ATAACGCCAA ACAGGATAAC GGCGATCCGT TGACCAGTGC ACAGCAGCGT
ATTCTGACCG ATCAGATGCG TACTCAGCGT GACCTGCTAA CCTCGCTGAT CTCCGGCTGT
GACTCACAGA TACTCGAACT GACCAAACTC AAAGTCGCCA ATAACCAACT GGCGGATGCA
TTGACCGAAA CACGCGAAGC GGCCCACCGC GATCTGTTCT GGGTTGCGGA TGTCGATCCT
GTGACGTTCG CCTATCCGCT CAAACTGGTG CAGGATCTGA CGCGTCTGCT GTCACTGGAT
ACGCTGACGC AACTGGGTAG CGCGCTGGTC ATGATGGTGA CGAGTCAGGA AACCGTGCTG
CCGCTGTTGG GCGCGCTGCT GTTGGTGGGC TTCAGCATCA GCTCCCGTCG TCACTATCAT
GCGTTTATGG AGCGCGCCAG CAGCCGCGTC GGCAAGGTCA CGCTCGATCA CTTTATGCTG
ACGCTGCGTA CCGTGTTCTG GTCCATCCTT ACCGCTCTTC CGCTGCCGGT ACTCTGGGCT
GCGTTGGGCT ATGGGCTGCA AAACGCCTGG CCTTATCCGA TTGCCGTCGC CATCGGCGAC
AGCGTGACCG CCACCGTGCC GTTGATGTGG CTGGTGATGA TCAGCGCCTC ATTCGCGCAC
CCGCAGGGAT TGTTCATTGT CCACTTCCGC TGGTCGCCGG AGCGCGTTGC CAGAGCGATG
CGCTATTATC GCCTTTCCAT CGCCTTTATC GTGCCGCTGA TTATGGCGCT GATTACGTTC
GATAACCTCA ACGATCGCGA ATTTTCCAGC ACCTTGGGGA GGCTCTGTTT CATCCTTCTC
TGTATGGCGC TGAGTCTGGT CACAACCGGG TTAAAACGCG CCGGTATCCC GCTGTATCTG
GATAAAGAAG GCTCGGGGGA AAACTCCGTT AACCGTGCGA TGTGGAATAT CCTGATCGCC
ATGCCGCTCG TTGCCGCGCT AGCCTCCTGT ATCGGCTATC TGGCGACCGC ACAGGCGCTG
CTGGCCCGTC TGGAAACCTC CGTCTCTATC TGGTTCTTCC TGCTGGTGGT TTACCATATT
ATTCGCCGCT GGATGCTGAT TCAGCGACGT CGCATCGCCT TCGACCGCGC CAAACAGCGA
CGTTCGGAAA TTCTGGCGCA GCGTGCCAAA GGTGAAGAAG ACACGCCGTC TGCATCGTCC
CATGAAAGCA GTTCGGAAGC GGTGGAAGAA CCCGTCGTCG ATCTGGACGC CATCAGCGCC
AAATCGCTGC AACTGGTGCG CTCCATTCTG ACGCTGATTG CACTGGTTTC CGTTATCGCG
CTGTGGTCGG AAATTCACTC CGCCTTCGCA TTCCTGGAAA ATATCAGCCT GTGGGATGTT
TCCAGCACGG TCAAAGGTGT GGAGAGCGTA CAGGCGATTA CACTGGGATC GGTGCTGATC
GCTATTCTGA TCTTCATTAT CACCGCGCAG TTGGTGCGTA ACCTGCCTGC CCTGCTGGAG
CTGGCGATCC TACAGCATCT GGATCTGTCG CCGGGTAGCG GCTACGCCAT TACCACCATC
AGCAAATATA TTCTGATGCT GATCGGCTGT CTGATGGGGT TCTCGCTGAT CGGGATCGAA
TGGTCGAAGC TGCAATGGCT AGTAGCCGCA CTGGGTGTGG GACTCGGATT CGGCTTGCAG
GAGATCTTCG CCAACTTTAT CTCTGGCCTG ATCATCCTAT TTGAGAAACC GATCCGTATC
GGCGATACCG TTACGATCCG CGATCTCACG GGTAGCGTCA TGCGCATTAA TACCCGCGCC
ACCACCATTT CCGACTGGGA CCGCAAAGAG ATCATCGTGC CAAACAAGGC ATTTATTACC
GAGCAGTTTA TCAACTGGTC ACTGTCGGAT TCCGTCACAC GTGTTGTGCT GACGGTGCCC
GCTCCGGCGG ACGCGAACAG CCAGGAAGTC ACAGAACTGC TGATGGATGC GGTGAAGCGT
TGTTCGCTGA TTCTGGATAC GCCAGAGCCT GAAGCCTTTC TGGTTGACCT GCAACAGGGG
ATTCAGATTT TCGAACTGCG CGTGTTCGCC GCTGAAATGG GGCACCGTAT GCCGCTGCGC
CATGAACTGC ATCAGCTGAT TCTGGAAAAC TATCGCAAGC ACAATCTGGA TCTTCCTTTC
CCACCGTTTC AGGTAAGAAT GGACAATCTG TCGCGCAGTG GAAGAACGCT GACGCCACGG
CAGCGGACGC CGGGCAGTTT ATAA
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| Protein sequence | MRLILTFLLG CLLSTATLAA TAPNEAQLRQ QLQQAEANKG AADQAKIVEE YQAALNTLQD
RKESLERATQ YQRVIDDFPK LVQELRRQLN AEDGKPSSIS ESLSSNDLEQ QLLQTSSQLL
EQARQLQQEQ DRLREIGDSL SQLPQQQTEA SRMQSEAERR IQSLGTPATP LGQAQLVALQ
AESALRKSRV DELELAQLSA SNRQELSRLR VELYKKRHDR LDLLQQDLRS RLNNLRQREA
EQALERTELL AEQSGDLPSV ISKQLQVNRE LSVALNQQAQ RMDLIASQQR QAATHTIQVR
QALSTIREQA QWLGVSPILG ETLRAQIARL PEMPKPQLLD SDMAQLRVQR LHFEDLINKP
QDLDNAKQDN GDPLTSAQQR ILTDQMRTQR DLLTSLISGC DSQILELTKL KVANNQLADA
LTETREAAHR DLFWVADVDP VTFAYPLKLV QDLTRLLSLD TLTQLGSALV MMVTSQETVL
PLLGALLLVG FSISSRRHYH AFMERASSRV GKVTLDHFML TLRTVFWSIL TALPLPVLWA
ALGYGLQNAW PYPIAVAIGD SVTATVPLMW LVMISASFAH PQGLFIVHFR WSPERVARAM
RYYRLSIAFI VPLIMALITF DNLNDREFSS TLGRLCFILL CMALSLVTTG LKRAGIPLYL
DKEGSGENSV NRAMWNILIA MPLVAALASC IGYLATAQAL LARLETSVSI WFFLLVVYHI
IRRWMLIQRR RIAFDRAKQR RSEILAQRAK GEEDTPSASS HESSSEAVEE PVVDLDAISA
KSLQLVRSIL TLIALVSVIA LWSEIHSAFA FLENISLWDV SSTVKGVESV QAITLGSVLI
AILIFIITAQ LVRNLPALLE LAILQHLDLS PGSGYAITTI SKYILMLIGC LMGFSLIGIE
WSKLQWLVAA LGVGLGFGLQ EIFANFISGL IILFEKPIRI GDTVTIRDLT GSVMRINTRA
TTISDWDRKE IIVPNKAFIT EQFINWSLSD SVTRVVLTVP APADANSQEV TELLMDAVKR
CSLILDTPEP EAFLVDLQQG IQIFELRVFA AEMGHRMPLR HELHQLILEN YRKHNLDLPF
PPFQVRMDNL SRSGRTLTPR QRTPGSL
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