| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_3748 |
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| Symbol | |
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| ID | 8134729 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | - |
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| Start bp | 4233609 |
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| End bp | 4234628 |
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| Gene Length | 1020 bp |
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| Protein Length | 339 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 644867049 |
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| Product | ABC transporter, substrate binding protein |
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| Protein accession | YP_003019299 |
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| Protein GI | 253690109 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0715] ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAATA ACAATGACAA GATCGATCGT AAACGCAGGC AGTTAATGAA GTGGTCAGCG
GTTAGCGCCG GTGCGCTGAC GCTAAGCAGC CTGCTGCCGG GCATGGCTTT TGCTGCCGAA
AGTGAAGAAA TCCGCATTGG CTACTGGCCG ATTGTGGGCG GTTTGCCTTT ATACGTGGGT
GTTGAACGCG GTTTTTTCAA AGAAGCAGGG TTGAATGTGC GAGCGGTGAA ATTCGCCAGC
CCGCAACAGA TTGTCGAGGG GATGATTACA GGACGTATAC ACGGGTGTGC CAACGGTACG
GCCACCGGCG CATTGGGATT AGGCGAGATT ACCTCACCCG GCTTGTTCAA GATCATTTGC
TCGAACCCGT CAAATCATCA GATGGTATTG GATGAATTTC TGGTGCCGTT GAACAGCGAT
GTAAAAAGTA TCGCGGAGTT GAAGGGCAAA CGTATCGCCT GTGGGCCGGG TATTCAGAAT
GTGGTGATGA CCAAAATCAT TCTGGAGAAA AACGGCTTTA CGGCGGATGA GTTGCGCGTG
ACCGAATTGC CGGTCGGGCA GCATGCCGCG GCGCTAGCCG CCGGTCAGAT TGACGGTGTT
TATACGCTGG AACCCACGGG GACGGTGGGC CGCCTGAAAG GGCTGTCGCG TACGCTGGAA
ACCGGGGTGA TCTCACGCTA TGTGCTCGGT AACCCTGATG CGCCCTGGTT TGGCGGTGCG
GCGGCATTGA ATGGCGGTTT TATCGAAAGC CGAGCGGCAG AGGCGAAAAC CTTCACGCAG
GCCTATGCCA AATCAGTGCA GTTTATTCAG CAGAATCCAG AAGCGGCGCG CGAGCACATT
ACCGGGTACA CCAGCATTGA AGCCGAGCTG AGTAAAGAGG TGCCGCTGCC GGGGTTTGTC
ATGTATGACG AGCTAAAAGG CGACAATCTG GCGTGGTTCC AGAAGTTTTA TGATGTGTTC
ACCGAAAGAA AAATCTTCCG GCAGCCGGTA GATGTCAGCA GCCTGATTTA TCAGCCTTAA
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| Protein sequence | MKNNNDKIDR KRRQLMKWSA VSAGALTLSS LLPGMAFAAE SEEIRIGYWP IVGGLPLYVG
VERGFFKEAG LNVRAVKFAS PQQIVEGMIT GRIHGCANGT ATGALGLGEI TSPGLFKIIC
SNPSNHQMVL DEFLVPLNSD VKSIAELKGK RIACGPGIQN VVMTKIILEK NGFTADELRV
TELPVGQHAA ALAAGQIDGV YTLEPTGTVG RLKGLSRTLE TGVISRYVLG NPDAPWFGGA
AALNGGFIES RAAEAKTFTQ AYAKSVQFIQ QNPEAAREHI TGYTSIEAEL SKEVPLPGFV
MYDELKGDNL AWFQKFYDVF TERKIFRQPV DVSSLIYQP
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