| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_3743 |
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| Symbol | |
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| ID | 8134724 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | - |
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| Start bp | 4229004 |
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| End bp | 4229621 |
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| Gene Length | 618 bp |
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| Protein Length | 205 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 644867044 |
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| Product | Lysine exporter protein (LYSE/YGGA) |
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| Protein accession | YP_003019294 |
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| Protein GI | 253690104 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1280] Putative threonine efflux protein |
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| TIGRFAM ID | [TIGR00949] The Resistance to Homoserine/Threonine (RhtB) Family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAATGAGT TAATTGCTGT CGCGACAATC ACCATTTTGG CGGTGATCAG TCCGGGGCCT
GATTTTGCCA TGGTGACCCG CAACAGCTAT GCCTTTGGTT TACGCGCCGG GTTAATCAGC
GCGTTTGGCA TTGCCTGCGG CGTCCAGATT CATGTGATGT ATACCGTTTT TGGCATCGCG
GTATTCATTG TCAGCTCCCC AATACTATTT ATGGCGATGA AGATTCTGGG GGCGTCATAT
CTGATTTATC TGGGGTACAA GTCATTAACC AATACGACAA AAATAACCGT AGAAGAGGCA
TCCGGTCATG CGCCATCAGC GCTTGCCGCG TTTCGCATGG GCTTTCTCAC CAATGCGCTT
AACCCGAAAA CCATGCTGTT TGTCGTCGCC ACCTATACCC AGATCGTACA GCCCGGTAGC
CCAATGAGCC ATAACGTTGG CTACGGATTA TTCATGTCGG TGGCGCACTG GGTCTGGTTC
AGCATTGTAG CGCTGTTTTT TGCCGCACCG GCTATGCGTC GCCGGCTGCT CGACAAGCAA
CGTCTGGTCG ACAAAGGTAT CGGCGTTGCA CTGATGGCGT TAGGTGCTTC TCTGGCATTG
ACCAAAATTA CCCTGTGA
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| Protein sequence | MNELIAVATI TILAVISPGP DFAMVTRNSY AFGLRAGLIS AFGIACGVQI HVMYTVFGIA
VFIVSSPILF MAMKILGASY LIYLGYKSLT NTTKITVEEA SGHAPSALAA FRMGFLTNAL
NPKTMLFVVA TYTQIVQPGS PMSHNVGYGL FMSVAHWVWF SIVALFFAAP AMRRRLLDKQ
RLVDKGIGVA LMALGASLAL TKITL
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