| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_3742 |
|---|
| Symbol | |
|---|
| ID | 8134723 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012917 |
|---|
| Strand | - |
|---|
| Start bp | 4227598 |
|---|
| End bp | 4228647 |
|---|
| Gene Length | 1050 bp |
|---|
| Protein Length | 349 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 644867043 |
|---|
| Product | Alcohol dehydrogenase zinc-binding domain protein |
|---|
| Protein accession | YP_003019293 |
|---|
| Protein GI | 253690103 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1064] Zn-dependent alcohol dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTTGTAC ACGCATATGG AGCCCATGCG GGCGATAAAC CTCTTGAGTC GTTGCAGATT
GTCCGCCGTG AGCCGGGAGC TCACGATGTT CAGATTGAGA TTGCGTACTG TGGTATCTGC
CACTCGGACT TGCATCAGGT ACGTGCCGAA TGGGCAGGAA CGCAGTTTCC CTGCGTGCCC
GGCCATGAAA TTGTCGGGCG AGTGTCTGCG GTAGGGGCAC ATGTCACTGG CTTCAAGGCT
GGCGATCTGG TGGGGATTGG TTGCATTGTG GACAGCTGTC GTCACTGTGA AGAGTGCGAT
GATGGCTTAG AAAATTACTG CGATGGTATG GTCGGCACGT ATAACGGCAA GACAACGGAT
GAGCCGGGTT GGACGTTCGG CGGCTATTCC CAGCAGATCG TCGTACATGA ACGTTATGTG
CTGCGTGTTC GTCATCCTGA GGCGGAACTG GCTGCTGTCG CCCCTCTGCT ATGTGCGGGG
ATTACCACCT ATTCGCCGCT GCGCCACTGG AATGCCGGGC CGGGTAAGAA GGTTGGCGTG
GTGGGTATCG GCGGGCTTGG CCACATGGGG ATTAAGCTGG CGCATGCCAT GGGTGCCTAT
GTTGTGGCGT TCACCACGTC TGAATCGAAA CGTGAAGATG CGAAGGCGCT AGGCGCAAAC
GAGGTCGTGG TTTCCCGTAA TGCTGAGGAA ATGGCGGCGC ACGCGAGCAG CTTCGATTTA
ATCCTGAATA CCGTTGCCGC ACCGCATGAT TTGGATGCGT TTCTGGTGCT GTTGAAACGC
GATGGTGCAT TAACGCTGGT CGGTGCGCCT GCATCACCGC ATCCTTCTCC TAACGTGTTC
AACCTGATCA TGAAACGCCG TACGGTGGCG GGATCGATGA TTGGCGGCAT TCCTGAAACG
CAGGAAATGC TGGATTTCTG TGCCGAGCAC GGGATTGTCT CCGATATCGA ACTGATCCGC
GCCGACGAAA TCAATGAGGC CTATGAGCGG ATGCTCAAAG GCGATGTGAA ATACCGCTTC
GTCATTGATA ATGCCACGCT GAACGCCTGA
|
|---|
| Protein sequence | MLVHAYGAHA GDKPLESLQI VRREPGAHDV QIEIAYCGIC HSDLHQVRAE WAGTQFPCVP
GHEIVGRVSA VGAHVTGFKA GDLVGIGCIV DSCRHCEECD DGLENYCDGM VGTYNGKTTD
EPGWTFGGYS QQIVVHERYV LRVRHPEAEL AAVAPLLCAG ITTYSPLRHW NAGPGKKVGV
VGIGGLGHMG IKLAHAMGAY VVAFTTSESK REDAKALGAN EVVVSRNAEE MAAHASSFDL
ILNTVAAPHD LDAFLVLLKR DGALTLVGAP ASPHPSPNVF NLIMKRRTVA GSMIGGIPET
QEMLDFCAEH GIVSDIELIR ADEINEAYER MLKGDVKYRF VIDNATLNA
|
|---|
| |