Gene PC1_3741 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_3741 
Symbol 
ID8134722 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand
Start bp4226847 
End bp4227389 
Gene Length543 bp 
Protein Length180 aa 
Translation table11 
GC content52% 
IMG OID644867042 
ProductLemA family protein 
Protein accessionYP_003019292 
Protein GI253690102 
COG category[S] Function unknown 
COG ID[COG1704] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAATTT ATCTTGGTTT AGCTCTGGTT GGTTTGGTGG TGGTCTGGGC GATTTTTACC 
TACAACCGGT TGATATCTCT GCGACGTTTT AAAGATGAAG CCTGGAGCGG CATTGCGGTA
CAGCTGAAGC GCCGCCATGA TTTGGCCCCC AATCTTCTGA CGTTGGTTAA GCGCTACGCG
CAGCACGAAA ACGATCTGCT GGAAGCCATT TCACGTCAGC GAACCAGCCA GACTGGCAGC
ACGCGCCAAA TTGCTCAGAA TGAACGGGAA TACTCAGGAA CGCTGGGGCG TTTTTTTGCG
CTGGCGGAAG CTTACCCTGA CCTGAAAGCC AACCAAAACT TCCTCGCCTT GCAGCAATCG
CTCTCTGAAA TTGAAGAGCA ACTTCAGATG TCGCGCCGCT ATTTCAATGC CACGGTGCGG
GATTTCAATA TTCAGGTGGA ATCCTTCCCC AGCCTGCTCA TTGCCAACCT GTTCCAGTTT
AAAACCGAAG CGTTCTTTGA ACTGGAAAAC CCCGCAGAGG GTGACGTTCC GCGGATGGAG
TGA
 
Protein sequence
MEIYLGLALV GLVVVWAIFT YNRLISLRRF KDEAWSGIAV QLKRRHDLAP NLLTLVKRYA 
QHENDLLEAI SRQRTSQTGS TRQIAQNERE YSGTLGRFFA LAEAYPDLKA NQNFLALQQS
LSEIEEQLQM SRRYFNATVR DFNIQVESFP SLLIANLFQF KTEAFFELEN PAEGDVPRME