Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PC1_3741 |
Symbol | |
ID | 8134722 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
Kingdom | Bacteria |
Replicon accession | NC_012917 |
Strand | - |
Start bp | 4226847 |
End bp | 4227389 |
Gene Length | 543 bp |
Protein Length | 180 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 644867042 |
Product | LemA family protein |
Protein accession | YP_003019292 |
Protein GI | 253690102 |
COG category | [S] Function unknown |
COG ID | [COG1704] Uncharacterized conserved protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGAAATTT ATCTTGGTTT AGCTCTGGTT GGTTTGGTGG TGGTCTGGGC GATTTTTACC TACAACCGGT TGATATCTCT GCGACGTTTT AAAGATGAAG CCTGGAGCGG CATTGCGGTA CAGCTGAAGC GCCGCCATGA TTTGGCCCCC AATCTTCTGA CGTTGGTTAA GCGCTACGCG CAGCACGAAA ACGATCTGCT GGAAGCCATT TCACGTCAGC GAACCAGCCA GACTGGCAGC ACGCGCCAAA TTGCTCAGAA TGAACGGGAA TACTCAGGAA CGCTGGGGCG TTTTTTTGCG CTGGCGGAAG CTTACCCTGA CCTGAAAGCC AACCAAAACT TCCTCGCCTT GCAGCAATCG CTCTCTGAAA TTGAAGAGCA ACTTCAGATG TCGCGCCGCT ATTTCAATGC CACGGTGCGG GATTTCAATA TTCAGGTGGA ATCCTTCCCC AGCCTGCTCA TTGCCAACCT GTTCCAGTTT AAAACCGAAG CGTTCTTTGA ACTGGAAAAC CCCGCAGAGG GTGACGTTCC GCGGATGGAG TGA
|
Protein sequence | MEIYLGLALV GLVVVWAIFT YNRLISLRRF KDEAWSGIAV QLKRRHDLAP NLLTLVKRYA QHENDLLEAI SRQRTSQTGS TRQIAQNERE YSGTLGRFFA LAEAYPDLKA NQNFLALQQS LSEIEEQLQM SRRYFNATVR DFNIQVESFP SLLIANLFQF KTEAFFELEN PAEGDVPRME
|
| |