Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PC1_3726 |
Symbol | |
ID | 8134706 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
Kingdom | Bacteria |
Replicon accession | NC_012917 |
Strand | - |
Start bp | 4205486 |
End bp | 4207030 |
Gene Length | 1545 bp |
Protein Length | 514 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 644867026 |
Product | hypothetical protein |
Protein accession | YP_003019277 |
Protein GI | 253690087 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0063] Predicted sugar kinase |
TIGRFAM ID | [TIGR00196] yjeF C-terminal region, hydroxyethylthiazole kinase-related [TIGR00197] yjeF N-terminal region |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.10556 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCATCATG CCACTGAGCC TTATCGGCTC GATACGGCAG AAACCACATT GCCTGATTTG GTGTTTTACG CCGAGTGGCT ACGCCATGAA GAAGCCAGGG CAGCCGCCGA ATCAGGGATT TCGCTGTGGG CGCTCATGCA GCGTGCGGGA GACGCCGCAT TTCAGGTGGC GCGCCAATGC TACCCCTCGG CTCGACGCTG GCGAGTTCTG GCCGGACACG GCAATAATGG CGGCGATGGA TATGTGGTCG CCAATTTGGC CATGGCTGCG GGCATTGACG TGGATGTTGT TGCCTGTGCC AGCGATAAGC CATTGCCCGA TGACGCTCGC CTTGCCCGCC AGCGCTGGCT GGAGCAGGGC GGGCGTGTTC AGGATGTTAA TGCGCAGGAT GCTGATTCGC CGTGGCCAGA AGGGATCGAT CTCATCGTTG ATGGCCTGCT CGGCACCGGG CTTTCCGCTG CTCCGCGTGC ACCCTATGCT GCGTTAATCA CGCAGGCAAA TGCTTATCCC GCCCCTATCG TTTCACTGGA TATTCCCTCT GGATTACATG CCGAAACCGG CGCTTGTGCT GGCGTCGCGA TCTGCGCGGC GCAGACGGTG ACGTTTATCG CGCTGAAACC GGGCTTACTG ACTGGCCGTG CTCGTGAACA GGTTGGGAAA TTACATTACC ACTCGCTAGG CTTACAGACA TGGCTGGATG AACAAACCGC GCCGATACGG CGACTGACTG CGGCGCAGCT TGCCAAATGG TTGTCTCCTC GACCGGCCGG ACAACATAAA GGCGATAACG GTAGGCTGCT GGTGGTGGGC GGCAACGCTG GCCTGGGTGG CGCGGTATTG ATGGCCGCCG ATGCGGCGTT ACACAGCGGT GCAGGCTTAG TGCGAGTACT TACTCACAAA CAGTATCAAT CGGCGTTTCT CACGGCCCGG CCTGAGTTAA TGGTGCAGGA ACTGACGACA GATACCTTGC ATCAGGGTCT GGAATGGGCG GATGTCGTCG TGATTGGACC CGGTTTAGGA CAGGATGAAT GGGGTAAAAG CGCGCTGCGT CTGGCAGAAA ATTGTAACAA ACCCATGTTA TGGGATGCGG ATGCGCTTAA CCTGCTGGCA ATCAATCCGC ATAAGCGGCA GAATCGCGTG CTGACACCTC ACCCCGGCGA GGCTGCACGT TTACTGAATT GCCGTGTCTC GGATATTGAA AGTGATCGCT TACTTGCGGT GACACGGTTG GTAAAACGCT ATGGTGGCGT TGTTGTGTTA AAAGGGGCGG GAACGGTGAT TGCCAGCGAG CGAGACGAGA TTGCCATTGC TGATGTGGGA AACCCAGGCA TGGCGACAGG TGGCATGGGA GATGTGCTAT CAGGTATTGT CGGCGGTTTG CTGGCACAAA AGCTCTCGCT GTATGATGCG GCTTGTGCCG GGTGTGTTGT ACACGGTGCG GCGGCCGATT GGTTGGCGGC ACGACGCGGG ACCCGAGGTA TGCTGGCAAC TGATTTACTG CCGGTGCTGT TCCGATATGT TAATCCCGAG CGGATGTGTT TATAG
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Protein sequence | MHHATEPYRL DTAETTLPDL VFYAEWLRHE EARAAAESGI SLWALMQRAG DAAFQVARQC YPSARRWRVL AGHGNNGGDG YVVANLAMAA GIDVDVVACA SDKPLPDDAR LARQRWLEQG GRVQDVNAQD ADSPWPEGID LIVDGLLGTG LSAAPRAPYA ALITQANAYP APIVSLDIPS GLHAETGACA GVAICAAQTV TFIALKPGLL TGRAREQVGK LHYHSLGLQT WLDEQTAPIR RLTAAQLAKW LSPRPAGQHK GDNGRLLVVG GNAGLGGAVL MAADAALHSG AGLVRVLTHK QYQSAFLTAR PELMVQELTT DTLHQGLEWA DVVVIGPGLG QDEWGKSALR LAENCNKPML WDADALNLLA INPHKRQNRV LTPHPGEAAR LLNCRVSDIE SDRLLAVTRL VKRYGGVVVL KGAGTVIASE RDEIAIADVG NPGMATGGMG DVLSGIVGGL LAQKLSLYDA ACAGCVVHGA AADWLAARRG TRGMLATDLL PVLFRYVNPE RMCL
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