Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PC1_3719 |
Symbol | |
ID | 8134699 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
Kingdom | Bacteria |
Replicon accession | NC_012917 |
Strand | - |
Start bp | 4197156 |
End bp | 4198418 |
Gene Length | 1263 bp |
Protein Length | 420 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 644867019 |
Product | FtsH protease regulator HflK |
Protein accession | YP_003019270 |
Protein GI | 253690080 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0330] Membrane protease subunits, stomatin/prohibitin homologs |
TIGRFAM ID | [TIGR01933] HflK protein |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.0503077 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCGTGGA ATCAGCCCGG TAATAACGGA CAAGACCGCG ACCCGTGGGG GAGCAGCAGC AATAATGGCG GCAACTCTGG CGGAAATAAC AATAAAGGTG GCCGAGATCA GGGGCCGCCG GATCTGGACG ACATCTTCCG TAAACTGAGC AAAAAACTCA GCGATCTGGG TGGCGGAAAA GGTTCTGGCT CAAGCAACAG CGGAAATTCT GGCGGCCCAG CTCTGGGTGG CCGGATCGTC GGTATCGCTG CCGTCGCTGC GGTTGTCATT TGGGCTGCTA CGGGTTTCTA TACCATCAAA GAAGCGGAAC GCGGTGTCGT AACGCGCTTT GGTAAATTTA GCCATTTGGT TGGGCCTGGT CTTAACTGGA AACCGACCTT CATCGACTCT GTTCGCGCAG TGAACGTCGA GTCGGTGCGT GAACTGGCGA CGTCGGGCGT GATGTTGACG TCAGACGAGA ACGTCGTGCG CGTTGAAATG AACGTGCAGT ATCGTGTCAC GCAGCCAGAA CAATATCTGT TCAGCGTAAC CAATGCGGAT GACAGCCTGC GTCAGGCCAC TGACAGTGCG CTGCGCGGCG TTATTGGTAA GTACACGATG GACAAAATTT TGACAGAAGG CCGTACCATT GTGCGTACGG ATACCCAGCG TGTACTGGAA GAAACCGTTC GTCCGTACAA CATGGGTGTC ACGCTGCTGG ACGTCAACTT CCAGACCGCG CGTCCGCCGG AGGAAGTGAA AGCCGCGTTT GATGATGCGA TTGCCGCACG TGAAAACGAA CAGCAATATA TTCGTGAAGC GGAAGCTTAC GCGAACGAAG TGCAGCCGCG TGCTAACGGT CAGGCCCAGC GTATTCTGGA AGAGTCTCGC GCTTATAAAA CCCGTACCGT TCTGGAAGCT CAGGGTGAAG TTGCCCGTTT CGCCAGAGTT TTACCGGAAT ATAAAGCCGC GCCGGAAATC ACCCGCGAGC GTCTGTATAT CGAAACGATG GAACGCGTGC TGAGCCATAC CCGCAAAGTG CTGGTCAATG ACAAGGGGGG CAACCTGATG GTGCTGCCGT TGGATCAGAT GCTGCGTGGA CAAGGCGGTG AAAATACGCA AAGCAACAGC AATAACAGCA GCGCTAGCCC ACTGCGTCTG CCTACTGGCA GCAGCGGTGC AGCGAACAGC AATCAGACGC GCAGCAGTAA CAATGGAAAT ATCATGGATC AGCGCAGAGC AAATGCGCAG CGTGATGACT TCACTCGAGT AGGGAGAGAA TAA
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Protein sequence | MAWNQPGNNG QDRDPWGSSS NNGGNSGGNN NKGGRDQGPP DLDDIFRKLS KKLSDLGGGK GSGSSNSGNS GGPALGGRIV GIAAVAAVVI WAATGFYTIK EAERGVVTRF GKFSHLVGPG LNWKPTFIDS VRAVNVESVR ELATSGVMLT SDENVVRVEM NVQYRVTQPE QYLFSVTNAD DSLRQATDSA LRGVIGKYTM DKILTEGRTI VRTDTQRVLE ETVRPYNMGV TLLDVNFQTA RPPEEVKAAF DDAIAARENE QQYIREAEAY ANEVQPRANG QAQRILEESR AYKTRTVLEA QGEVARFARV LPEYKAAPEI TRERLYIETM ERVLSHTRKV LVNDKGGNLM VLPLDQMLRG QGGENTQSNS NNSSASPLRL PTGSSGAANS NQTRSSNNGN IMDQRRANAQ RDDFTRVGRE
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