| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_3718 |
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| Symbol | |
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| ID | 8134698 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | - |
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| Start bp | 4196157 |
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| End bp | 4197152 |
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| Gene Length | 996 bp |
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| Protein Length | 331 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 644867018 |
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| Product | FtsH protease regulator HflC |
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| Protein accession | YP_003019269 |
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| Protein GI | 253690079 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0330] Membrane protease subunits, stomatin/prohibitin homologs |
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| TIGRFAM ID | [TIGR01932] HflC protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0820553 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGTAAGC CCTTACTATT TATCCTGATC CTGGTACTGA TGGTGGTCTA TGCGTCACTG
TTTGTGGTGC AGGAAGGCCA GCGCGGCATT GTGATGCGCT TTGGCAAAGT ATTGCGTGAT
GACGAGAATA AGCCGCTGAT TTATGCTCCG GGATTGCAGT TCAAGATTCC GTTTATCGAC
TCAGTGAAAA TGCTGGACGC GCGTATCCAG ACGATGGAAA ACCAGGCTGA CCGCTTTATC
ACTAAAGAGC AGAAAGACCT GATCGTCGAT TCTTACCTTA AATGGCGTAT CAGCGATTTC
AGCCGCTACT ATCTGGCAAC GGGCGGTGGC GACATTTCTC AGGCTGAAGT GCTGTTGAAA
CGTAAATTCA GTGACCGTCT GCGTTCTGAG ATTGGTCGTC TGGATGTGAA AGGCATTGTT
ACCGACTCAC GTGGTCAACT GATGTCTGAC GTGCGTGAAG CGCTGAATAC CGGTACGGGT
GAAACCACCG AAGCCGATAA TGCGATTGCT TCTGCTGCTG CGCGCGTTGA GAAAGAAACG
ACGGGCAACG AACCTCACAT CAACCCTAAC AGCATGGCTG CACTGGGTAT TGAGGTTATC
GATGTGCGAA TTAAGCAAAT CAACCTGCCA ACAGAAGTTT CTGACGCGAT TTACCAGCGT
ATGCGCGCAG AGCGTGAAGC GGTAGCGCGT CGTCACCGTT CACAAGGTCA GGAAGAAGCT
GAAAAGCTGA AAGCGGCGGC AGACTATGAA GTCACTCGTA CGCTGGCTGA AGCTGAACGT
CAGGGACGTA TCACCCGTGG TGAAGGGGAT GCCGAAGCGG CGAAACTGTT TGCGAACGCA
TTCAGTGAAG ATCCTGACTT CTACGCTTTT GTTCGTAGCC TGCGCGCGTA TGAAAGCAGC
TTCAGTAATA ATCAGGATGT GATGGTTCTC AGCCCGGATA GCGACTTCTT CCGCTACATG
AAGTCACCGG ATAGCAGTAT GGCACCACGC CGCTGA
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| Protein sequence | MRKPLLFILI LVLMVVYASL FVVQEGQRGI VMRFGKVLRD DENKPLIYAP GLQFKIPFID
SVKMLDARIQ TMENQADRFI TKEQKDLIVD SYLKWRISDF SRYYLATGGG DISQAEVLLK
RKFSDRLRSE IGRLDVKGIV TDSRGQLMSD VREALNTGTG ETTEADNAIA SAAARVEKET
TGNEPHINPN SMAALGIEVI DVRIKQINLP TEVSDAIYQR MRAEREAVAR RHRSQGQEEA
EKLKAAADYE VTRTLAEAER QGRITRGEGD AEAAKLFANA FSEDPDFYAF VRSLRAYESS
FSNNQDVMVL SPDSDFFRYM KSPDSSMAPR R
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